myRT

myRT report for GCA_003481015.1_ASM348101v1

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Seq: QUKE01000013.1 Clostridium sp. TM06-18 TM06-18.Scaf13, whole genome shotgun sequence (106633 bp)
Overview 1 RT 1: 38339-40933 bp Neighborhood of RT #1 [38339, 40938] Phage_holin_Dp1 RVT-DGRs Phage_XkdX Feature: gene Location: 38339-38554 bp Feature: domain Description: Phage_holin_Dp1 Location: 38348-38534 bp Feature: domain Description: Phage_holin_Dp1 Location: 38348-38534 bp Feature: gene Location: 38541-38876 bp Feature: gene Location: 38902-40098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39097-39820 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39097-39820 bp Feature: gene Location: 40304-40711 bp Feature: gene Location: 40795-40938 bp Feature: domain Description: Phage_XkdX Location: 40816-40933 bp Feature: domain Description: Phage_XkdX Location: 4081 6-40933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_Dp1 (pfam16938), RVT-DGRs, Phage_XkdX (pfam09693)

Seq: QUKE01000026.1 Clostridium sp. TM06-18 TM06-18.Scaf26, whole genome shotgun sequence (57711 bp)
Overview 1 RT 1: 12316-17164 bp Neighborhood of RT #1 [12316, 17583] Phage_holin_4_1 RVT-DGRs DUF2313 Feature: gene Location: 12316-12738 bp Feature: domain Description: Phage_holin_4_1 Location: 12361-12715 bp Feature: domain Description: Phage_holin_4_1 Location: 12 361-12 715 bp Feature: gene Location: 13016-13150 bp Feature: gene Location: 13392-14684 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13698-14400 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13698-14400 bp Feature: gene Location: 14969-16774 bp Feature: gene Location: 16789-17583 bp Feature: domain Description: DUF2313 Location: 16807-17164 bp Feature: domain Description: DUF2 313 Location: 16807-17164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs, DUF2313 (pfam10076)

Seq: QUKE01000005.1 Clostridium sp. TM06-18 TM06-18.Scaf5, whole genome shotgun sequence (231245 bp)
Overview 1 RT 1: 223716-227613 bp Neighborhood of RT #1 [223716, 227613] RVT-DGRs Feature: gene Location: 223716-225035 bp Feature: gene Location: 225165-225293 bp Feature: gene Location: 225434-226636 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 225725-226286 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 225725-226286 bp Feature: gene Location: 227062-227289 bp Feature: gene Location: 227341-227613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs