myRT

myRT report for GCA_003481285.1_ASM348128v1

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Seq: QUKR01000119.1 Ruminococcus sp. TF06-23 TF06-23.Scaf119, whole genome shotgun sequence (1294 bp)
Overview 1 RT 1: 110-953 bp Neighborhood of RT #1 [110, 1291] RVT-GII Intron_maturas2 Feature: gene Location: 110-1291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9-572 bp Feature: domain Description: Intron_maturas2 Location: 650-953 bp Feature: domain Description: Intron_maturas2 Location: 650-953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: QUKR01000025.1 Ruminococcus sp. TF06-23 TF06-23.Scaf25, whole genome shotgun sequence (58671 bp)
Overview 1 RT 1: 433-3099 bp Neighborhood of RT #1 [433, 3227] group_II_RT_mat RVT-GII GIIM CAPF_like_SDR_e Feature: gene Location: 433-762 bp Feature: gene Location: 771-1145 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 861-1038 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 861-1038 bp Feature: gene Location: 1199-2068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1220-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 0-1712 bp Feature: domain Description: GIIM Note: maturase Location: 1772-1997 bp Feature: domain Description: GIIM Note: maturase Location: 1772 -1997 bp Feature: gene Location: 2402-2683 bp Feature: gene Location: 2646-3227 bp Feature: domain Description: CAPF_like_SDR_e Location: 2691-3099 bp Feature: domain Description: CAPF_like_SDR_e Location: 2 691-3099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CAPF_like_SDR_e (cd05261), group_II_RT_mat (TIGR04416)

Seq: QUKR01000097.1 Ruminococcus sp. TF06-23 TF06-23.Scaf97, whole genome shotgun sequence (3689 bp)
Overview 1 RT 1: 3-2144 bp Neighborhood of RT #1 [3, 2206] RVT-GII Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 3-152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-123 bp Feature: gene Location: 229-1242 bp Feature: domain Description: Phage_int_SAM_1 Location: 283-529 bp Feature: domain Description: Phage_int_SAM_1 Location: 283 -529 bp Feature: domain Description: INT_RitC_C_like Location: 610-1156 bp Feature: domain Description: INT_RitC_C_like Location: 610-1156 bp Feature: gene Location: 1223-2206 bp Feature: domain Description: INT_RitB_C_like Location: 1559-2144 bp Feature: domain Description: INT_RitB_C_like Location: 1559-2144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII