myRT

myRT report for GCA_003481455.1_ASM348145v1

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Seq: QULI01000011.1 Blautia sp. OM05-6 OM05-6.Scaf11, whole genome shotgun sequence (151844 bp)
Overview 1 RT 1: 116869-123424 bp 2 RT 2: 129793-134295 bp Neighborhood of RT #1 [116869, 123424] HNH_4 RVT-GII GIIM Neighborhood of RT #2 [129793, 134330] LacZ PRK10572 PRK10572 RVT-GII PolyPPase_VTC_like Feature: gene Location: 116869-117960 bp Feature: domain Description: HNH_4 Location: 117586-117706 bp Feature: domain Description: HNH_4 Location: 1 1 7586-1 1 7706 bp Feature: gene Location: 118096-118245 bp Feature: gene Location: 118342-119184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118498-118825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 8498-1 1 8825 bp Feature: domain Description: GIIM Note: maturase Location: 118885-119110 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 8885-1 1 91 1 0 bp Feature: gene Location: 119343-123047 bp Feature: gene Location: 123182-123424 bp Feature: gene Location: 129793-131511 bp Feature: domain Description: LacZ Location: 129844-131110 bp Feature: domain Description: LacZ Location: 1 29844-1 31 1 1 0 bp Feature: gene Location: 131580-132500 bp Feature: domain Description: PRK10572 Location: 131814-131949 bp Feature: domain Description: PRK1 0572 Location: 1 31 81 4-1 31 949 bp Feature: domain Description: PRK10572 Location: 132150-132474 bp Feature: domain Description: PRK1 0572 Location: 1 321 50-1 32474 bp Feature: gene Location: 132775-133110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132913-133102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3291 3-1 331 02 bp Feature: gene Location: 133127-133414 bp Feature: gene Location: 133635-134330 bp Feature: domain Description: PolyPPase_VTC_like Location: 133653-134295 bp Feature: domain Description: PolyPPase_VTC_like Location: 1 33653-1 34295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_4 (pfam13395), RVT-GII, GIIM (pfam08388), LacZ (COG3250), PRK10572 (arabinose operon transcriptional regulator AraC), PolyPPase_VTC_like (cd07750)

Seq: QULI01000015.1 Blautia sp. OM05-6 OM05-6.Scaf15, whole genome shotgun sequence (104488 bp)
Overview 1 RT 1: 76-3055 bp Neighborhood of RT #1 [76, 3055] COG3415 DDE_3 RVT-GII Feature: gene Location: 76-1242 bp Feature: domain Description: COG3415 Location: 172-550 bp Feature: domain Description: COG3415 Location: 172 -550 bp Feature: domain Description: DDE_3 Location: 742-1135 bp Feature: domain Description: DDE_3 Location: 742 -1135 bp Feature: gene Location: 1265-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1475-2021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1475-2 02 1 bp Feature: gene Location: 2383-2622 bp Feature: gene Location: 2699-3055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT-GII

Seq: QULI01000029.1 Blautia sp. OM05-6 OM05-6.Scaf29, whole genome shotgun sequence (32957 bp)
Overview 1 RT 1: 2461-8861 bp Neighborhood of RT #1 [2461, 8875] Mob_Pre YbxI RVT-UG2 PRK06762 Feature: gene Location: 2461-3774 bp Feature: domain Description: Mob_Pre Location: 2494-2578 bp Feature: domain Description: Mob_Pre Location: 2494-2578 bp Feature: gene Location: 3963-5099 bp Feature: domain Description: YbxI Location: 4356-5088 bp Feature: domain Description: YbxI Location: 43 56-5088 bp Feature: gene Location: 5536-6882 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5734-6571 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 573 4-6571 bp Feature: gene Location: 6968-8104 bp Feature: gene Location: 8375-8875 bp Feature: domain Description: PRK06762 Location: 8378-8861 bp Feature: domain Description: PRK06762 Location: 83 78-8861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mob_Pre (pfam01076), YbxI (COG2602), RVT-UG2, PRK06762 (hypothetical protein; Provisional)

Seq: QULI01000033.1 Blautia sp. OM05-6 OM05-6.Scaf33, whole genome shotgun sequence (19430 bp)
Overview 1 RT 1: 4397-10221 bp Neighborhood of RT #1 [4397, 10286] pfam13191 TPR RVT-GII AlbA_2 TIR_2 GAF Feature: gene Location: 4397-4549 bp Feature: gene Location: 5104-7461 bp Feature: domain Description: pfam13191 Location: 5611-5764 bp Feature: domain Description: pfam13191 Location: 5611-5764 bp Feature: domain Description: TPR Location: 6745-7429 bp Feature: domain Description: TPR Location: 674 5-74 29 bp Feature: gene Location: 7593-8033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7911-7968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7911-7968 bp Feature: gene Location: 8406-8651 bp Feature: gene Location: 8793-10286 bp Feature: domain Description: AlbA_2 Location: 8889-9180 bp Feature: domain Description: AlbA_2 Location: 8889-9180 bp Feature: domain Description: TIR_2 Location: 9210-9603 bp Feature: domain Description: TIR_2 Location: 9210-9603 bp Feature: domain Description: GAF Location: 9984-10221 bp Feature: domain Description: GAF Location: 9984 -10221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam13191 (AAA_16;AAA ATPase domain), TPR (smart00028), RVT-GII, AlbA_2 (pfam04326), TIR_2 (pfam13676), GAF (smart00065)

Seq: QULI01000044.1 Blautia sp. OM05-6 OM05-6.Scaf44, whole genome shotgun sequence (2154 bp)
Overview 1 RT 1: 553-1843 bp Neighborhood of RT #1 [553, 2061] RVT_N RVT-GII GIIM Feature: gene Location: 553-2061 bp Feature: domain Description: RVT_N Location: 610-853 bp Feature: domain Description: RVT_N Location: 610-85 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-15 5 8 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1843 bp Feature: domain Description: GIIM Note: maturase Location: 1609-1843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QULI01000050.1 Blautia sp. OM05-6 OM05-6.Scaf50, whole genome shotgun sequence (1594 bp)
Overview 1 RT 1: 1-1412 bp Neighborhood of RT #1 [1, 1519] RVT-GII COG3415 DDE_3 Feature: gene Location: 1-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-322 bp Feature: gene Location: 353-1519 bp Feature: domain Description: COG3415 Location: 449-827 bp Feature: domain Description: COG3415 Location: 449-827 bp Feature: domain Description: DDE_3 Location: 1019-1412 bp Feature: domain Description: DDE_3 Location: 1019-1412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3415 (Transposase ), DDE_3 (pfam13358)

Seq: QULI01000006.1 Blautia sp. OM05-6 OM05-6.Scaf6, whole genome shotgun sequence (219519 bp)
Overview 1 RT 1: 81180-86908 bp Neighborhood of RT #1 [81180, 87039] PnbA MATE_yoeA_like RVT-GII GIIM HTH_28 HTH_28 HTH_28 Feature: gene Location: 81180-82754 bp Feature: domain Description: PnbA Location: 81216-82668 bp Feature: domain Description: PnbA Location: 81216-82668 bp Feature: gene Location: 83054-84415 bp Feature: domain Description: MATE_yoeA_like Location: 83108-84392 bp Feature: domain Description: MATE_yoeA_like Location: 83108-84392 bp Feature: gene Location: 84673-85950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84886-85501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84886-85501 bp Feature: domain Description: GIIM Note: maturase Location: 85567-85789 bp Feature: domain Description: GIIM Note: maturase Location: 85567 -857 89 bp Feature: gene Location: 85952-86182 bp Feature: gene Location: 86362-87039 bp Feature: domain Description: HTH_28 Location: 86404-86518 bp Feature: domain Description: HTH_28 Location: 86404-86518 bp Feature: domain Description: HTH_28 Location: 86563-86680 bp Feature: domain Description: HTH_28 Location: 86563-86680 bp Feature: domain Description: HTH_28 Location: 86752-86908 bp Feature: domain Description: HTH_28 Location: 867 52-86908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PnbA (COG2272), MATE_yoeA_like (cd13138), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518)