myRT

myRT report for GCA_003481775.1_ASM348177v1

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Seq: QULU01000108.1 Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf108, whole genome shotgun sequence (1793 bp)
Overview 1 RT 1: 402-1486 bp Neighborhood of RT #1 [402, 1701] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 402-692 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 432-624 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 432-624 bp Feature: gene Location: 754-1701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760-1 222 bp Feature: domain Description: GIIM Note: maturase Location: 1276-1486 bp Feature: domain Description: GIIM Note: maturase Location: 1 276-1 486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: QULU01000002.1 Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf2, whole genome shotgun sequence (273110 bp)
Overview 1 RT 1: 115901-132452 bp Neighborhood of RT #1 [115901, 132460] SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA SpaA DUF11 DUF11 SdrD_B SpaA SdrD_B SdrD_B SdrD_B RVT-GII GIIM DnrI SUA5 Feature: gene Location: 115901-128134 bp Feature: domain Description: SpaA Location: 117299-117482 bp Feature: domain Description: SpaA Location: 1172 99-117482 bp Feature: domain Description: SpaA Location: 117644-117845 bp Feature: domain Description: SpaA Location: 117644-117845 bp Feature: domain Description: SpaA Location: 117968-118202 bp Feature: domain Description: SpaA Location: 117968-1182 02 bp Feature: domain Description: SpaA Location: 118295-118511 bp Feature: domain Description: SpaA Location: 1182 95-118511 bp Feature: domain Description: SpaA Location: 118628-118796 bp Feature: domain Description: SpaA Location: 11862 8-118796 bp Feature: domain Description: SpaA Location: 118937-119150 bp Feature: domain Description: SpaA Location: 118937-119150 bp Feature: domain Description: SpaA Location: 119267-119480 bp Feature: domain Description: SpaA Location: 1192 67-119480 bp Feature: domain Description: SpaA Location: 119945-120074 bp Feature: domain Description: SpaA Location: 119945-12 0074 bp Feature: domain Description: SpaA Location: 120251-120515 bp Feature: domain Description: SpaA Location: 12 02 51-12 0515 bp Feature: domain Description: SpaA Location: 120734-120902 bp Feature: domain Description: SpaA Location: 12 0734-12 0902 bp Feature: domain Description: SpaA Location: 121016-121250 bp Feature: domain Description: SpaA Location: 12 1016-12 12 50 bp Feature: domain Description: SpaA Location: 121346-121559 bp Feature: domain Description: SpaA Location: 12 1346-12 1559 bp Feature: domain Description: SpaA Location: 121700-121862 bp Feature: domain Description: SpaA Location: 12 1700-12 1862 bp Feature: domain Description: SpaA Location: 122018-122195 bp Feature: domain Description: SpaA Location: 12 2 018-12 2 195 bp Feature: domain Description: SpaA Location: 122336-122513 bp Feature: domain Description: SpaA Location: 12 2 336-12 2 513 bp Feature: domain Description: SpaA Location: 122636-122813 bp Feature: domain Description: SpaA Location: 12 2 636-12 2 813 bp Feature: domain Description: SpaA Location: 122936-123137 bp Feature: domain Description: SpaA Location: 12 2 936-12 3137 bp Feature: domain Description: SpaA Location: 123251-123413 bp Feature: domain Description: SpaA Location: 12 32 51-12 3413 bp Feature: domain Description: SpaA Location: 123536-123728 bp Feature: domain Description: SpaA Location: 12 3536-12 372 8 bp Feature: domain Description: DUF11 Location: 124577-124721 bp Feature: domain Description: DUF11 Location: 12 4577-12 472 1 bp Feature: domain Description: DUF11 Location: 125249-125399 bp Feature: domain Description: DUF11 Location: 12 52 49-12 5399 bp Feature: domain Description: SdrD_B Location: 125927-126329 bp Feature: domain Description: SdrD_B Location: 12 592 7-12 632 9 bp Feature: domain Description: SpaA Location: 126497-126626 bp Feature: domain Description: SpaA Location: 12 6497-12 662 6 bp Feature: domain Description: SdrD_B Location: 126836-127190 bp Feature: domain Description: SdrD_B Location: 12 6836-12 7190 bp Feature: domain Description: SdrD_B Location: 127208-127583 bp Feature: domain Description: SdrD_B Location: 12 72 08-12 7583 bp Feature: domain Description: SdrD_B Location: 127601-127961 bp Feature: domain Description: SdrD_B Location: 12 7601-12 7961 bp Feature: gene Location: 128209-128511 bp Feature: gene Location: 128508-129791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128712-129327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 8712 -12 932 7 bp Feature: domain Description: GIIM Note: maturase Location: 129387-129618 bp Feature: domain Description: GIIM Note: maturase Location: 12 9387-12 9618 bp Feature: gene Location: 130345-131532 bp Feature: domain Description: DnrI Location: 130366-131125 bp Feature: domain Description: DnrI Location: 130366-13112 5 bp Feature: gene Location: 131717-132460 bp Feature: domain Description: SUA5 Location: 131852-132452 bp Feature: domain Description: SUA5 Location: 131852 -132 452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpaA (pfam17802), DUF11 (pfam01345), SdrD_B (pfam17210), RVT-GII, GIIM (pfam08388), DnrI (COG3629), SUA5 (pfam03481)

Seq: QULU01000039.1 Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf39, whole genome shotgun sequence (42974 bp)
Overview 1 RT 1: 17099-21920 bp Neighborhood of RT #1 [17099, 21937] rpmB thrS UMPK_like RVT-GII TPK Feature: gene Location: 17099-17290 bp Feature: domain Description: rpmB Location: 17102-17279 bp Feature: domain Description: rpmB Location: 17102-17279 bp Feature: gene Location: 17579-19204 bp Feature: domain Description: thrS Location: 17585-18191 bp Feature: domain Description: thrS Location: 17585-18191 bp Feature: domain Description: UMPK_like Location: 18413-19007 bp Feature: domain Description: UMPK_like Location: 18413 -19007 bp Feature: gene Location: 19419-20615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19656-20217 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19656-20217 bp Feature: gene Location: 20994-21155 bp Feature: gene Location: 21329-21937 bp Feature: domain Description: TPK Location: 21386-21920 bp Feature: domain Description: TPK Location: 213 86-21920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpmB (PRK00359), thrS (TIGR00418), UMPK_like (cd02028), RVT-GII, TPK (cl21552)

Seq: QULU01000007.1 Clostridiaceae bacterium OM02-2AC OM02-2AC.Scaf7, whole genome shotgun sequence (121432 bp)
Overview 1 RT 1: 48940-53060 bp Neighborhood of RT #1 [48940, 53131] RVT-DGRs Avd_like Phage_int_SAM_3 INT_ICEBs1_C_like Feature: gene Location: 48940-49128 bp Feature: gene Location: 49600-49932 bp Feature: gene Location: 50363-51349 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50561-51167 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50561-51167 bp Feature: gene Location: 51420-51989 bp Feature: domain Description: Avd_like Location: 51456-51792 bp Feature: domain Description: Avd_like Location: 514 56-51792 bp Feature: gene Location: 52091-53131 bp Feature: domain Description: Phage_int_SAM_3 Location: 52169-52337 bp Feature: domain Description: Phage_int_SAM_3 Location: 52169-52337 bp Feature: domain Description: INT_ICEBs1_C_like Location: 52568-53060 bp Feature: domain Description: INT_ICEBs1_C_like Location: 52568-53060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)