myRT

myRT report for GCA_003481835.1_ASM348183v1

Download annotations/find similar RTs

Seq: QULX01000015.1 Roseburia sp. OM02-15 OM02-15.Scaf15, whole genome shotgun sequence (78854 bp)
Overview 1 RT 1: 37630-41397 bp Neighborhood of RT #1 [37630, 41414] RVT-DGRs Phage_XkdX Feature: gene Location: 37630-38043 bp Feature: gene Location: 38059-39315 bp Feature: gene Location: 39662-40357 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39917-40352 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3991 7-40352 bp Feature: gene Location: 40496-41023 bp Feature: gene Location: 41196-41414 bp Feature: domain Description: Phage_XkdX Location: 41262-41397 bp Feature: domain Description: Phage_XkdX Location: 41 262-41 397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)

Seq: QULX01000048.1 Roseburia sp. OM02-15 OM02-15.Scaf48, whole genome shotgun sequence (1880 bp)
Overview 1 RT 1: 93-1686 bp Neighborhood of RT #1 [93, 1686] RVT-GII Feature: gene Location: 93-1388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-1038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-1038 bp Feature: gene Location: 1441-1686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QULX01000006.1 Roseburia sp. OM02-15 OM02-15.Scaf6, whole genome shotgun sequence (203570 bp)
Overview 1 RT 1: 68245-70833 bp 2 RT 2: 115656-121001 bp Neighborhood of RT #1 [68245, 70844] XhlA RVT-DGRs Avd_like Neighborhood of RT #2 [115656, 121012] RVT-UG27 Lig Feature: gene Location: 68245-68601 bp Feature: gene Location: 68598-68834 bp Feature: domain Description: XhlA Location: 68679-68820 bp Feature: domain Description: XhlA Location: 68679-68820 bp Feature: gene Location: 69090-70142 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 69300-69906 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 693 00-69906 bp Feature: gene Location: 70280-70435 bp Feature: gene Location: 70440-70844 bp Feature: domain Description: Avd_like Location: 70527-70833 bp Feature: domain Description: Avd_like Location: 70527-7083 3 bp Feature: gene Location: 115656-116558 bp Feature: gene Location: 116551-116982 bp Feature: gene Location: 117520-118779 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 117706-118336 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 117706-1183 3 6 bp Feature: gene Location: 118840-119004 bp Feature: gene Location: 119015-121012 bp Feature: domain Description: Lig Location: 119024-121001 bp Feature: domain Description: Lig Location: 119024-121001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XhlA (pfam10779), RVT-DGRs, Avd_like (cd16376), RVT-UG27, Lig (COG0272)