myRT

myRT report for GCA_003481985.1_ASM348198v1

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Seq: QUMD01000010.1 Clostridium sp. OF09-36 OF09-36.Scaf10, whole genome shotgun sequence (122238 bp)
Overview 1 RT 1: 93182-95064 bp Neighborhood of RT #1 [93182, 95159] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 93182-93328 bp Feature: gene Location: 93437-93571 bp Feature: gene Location: 93607-94497 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93673-94294 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93673-94294 bp Feature: gene Location: 94522-94701 bp Feature: gene Location: 94698-95159 bp Feature: domain Description: Phage_holin_4_1 Location: 94737-95064 bp Feature: domain Description: Phage_holin_4_1 Location: 94737-95064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: QUMD01000024.1 Clostridium sp. OF09-36 OF09-36.Scaf24, whole genome shotgun sequence (54807 bp)
Overview 1 RT 1: 33185-37620 bp Neighborhood of RT #1 [33185, 37643] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 33185-34990 bp Feature: gene Location: 35117-35269 bp Feature: gene Location: 35275-36567 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35581-36283 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35581-362 83 bp Feature: gene Location: 36809-36943 bp Feature: gene Location: 37221-37643 bp Feature: domain Description: Phage_holin_4_1 Location: 37266-37620 bp Feature: domain Description: Phage_holin_4_1 Location: 372 66-3762 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: QUMD01000005.1 Clostridium sp. OF09-36 OF09-36.Scaf5, whole genome shotgun sequence (201666 bp)
Overview 1 RT 1: 22373-24529 bp Neighborhood of RT #1 [22373, 24534] Avd_like RVT-DGRs Phage_XkdX Feature: gene Location: 22373-22831 bp Feature: domain Description: Avd_like Location: 22469-22796 bp Feature: domain Description: Avd_like Location: 22469-22796 bp Feature: gene Location: 22848-23036 bp Feature: gene Location: 23084-24205 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23339-23948 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23 3 3 9-23 948 bp Feature: gene Location: 24195-24362 bp Feature: gene Location: 24355-24534 bp Feature: domain Description: Phage_XkdX Location: 24412-24529 bp Feature: domain Description: Phage_XkdX Location: 24412-24529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_XkdX (pfam09693)

Seq: QUMD01000055.1 Clostridium sp. OF09-36 OF09-36.Scaf55, whole genome shotgun sequence (3815 bp)
Overview 1 RT 1: 75-3062 bp Neighborhood of RT #1 [75, 3334] RVT-GII GIIM tspaseT_teng_C Feature: gene Location: 75-1352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 288-906 bp Feature: domain Description: GIIM Note: maturase Location: 966-1188 bp Feature: domain Description: GIIM Note: maturase Location: 966-1188 bp Feature: gene Location: 1691-1921 bp Feature: gene Location: 2009-3334 bp Feature: domain Description: tspaseT_teng_C Location: 2846-3062 bp Feature: domain Description: tspaseT_teng_C Location: 284 6-3062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tspaseT_teng_C (TIGR01766), RVT-GII, GIIM (pfam08388)

Seq: QUMD01000070.1 Clostridium sp. OF09-36 OF09-36.Scaf70, whole genome shotgun sequence (1868 bp)
Overview 1 RT 1: 3-1427 bp Neighborhood of RT #1 [3, 1777] RVT-GII Feature: gene Location: 3-143 bp Feature: gene Location: 147-368 bp Feature: gene Location: 482-1777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-1427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII