myRT

myRT report for GCA_003483205.1_ASM348320v1

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Seq: DMWP01000057.1 TPA_asm: Verrucomicrobia bacterium isolate UBA8416 contig_12049, whole genome shotgun sequence (6613 bp)
Overview 1 RT 1: 1-3436 bp Neighborhood of RT #1 [1, 3468] RVT-GII GIIM HNHc hemE Ap4A_hydrolase_human_like Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82-742 bp Feature: domain Description: GIIM Note: maturase Location: 793-1027 bp Feature: domain Description: GIIM Note: maturase Location: 793-1 027 bp Feature: domain Description: HNHc Note: nucleases Location: 1246-1411 bp Feature: domain Description: HNHc Note: nucleases Location: 1 246-1 41 1 bp Feature: gene Location: 1908-2993 bp Feature: domain Description: hemE Location: 1923-2955 bp Feature: domain Description: hemE Location: 1 923-2955 bp Feature: gene Location: 2980-3468 bp Feature: domain Description: Ap4A_hydrolase_human_like Location: 3052-3436 bp Feature: domain Description: Ap4A_hydrolase_human_like Location: 3052-3436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), hemE (TIGR01464), Ap4A_hydrolase_human_like (cd03428)

Seq: DMWP01000040.1 TPA_asm: Verrucomicrobia bacterium isolate UBA8416 contig_20897, whole genome shotgun sequence (3407 bp)
Overview 1 RT 1: 2-3111 bp Neighborhood of RT #1 [2, 3111] Methyltransf_31 CmuC_like RVT-GII Feature: gene Location: 2-682 bp Feature: domain Description: Methyltransf_31 Location: 248-608 bp Feature: domain Description: Methyltransf_31 Location: 2 48-608 bp Feature: gene Location: 700-1770 bp Feature: domain Description: CmuC_like Location: 949-1696 bp Feature: domain Description: CmuC_like Location: 949-1696 bp Feature: gene Location: 2163-2579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2478-2547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 478-2 547 bp Feature: gene Location: 2455-2766 bp Feature: gene Location: 2797-3111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Methyltransf_31 (pfam13847), CmuC_like (cd03309)

Seq: DMWP01000476.1 TPA_asm: Verrucomicrobia bacterium isolate UBA8416 contig_5357, whole genome shotgun sequence (3649 bp)
Overview 1 RT 1: 13-3110 bp Neighborhood of RT #1 [13, 3110] RVT-GII GIIM YczE Feature: gene Location: 13-252 bp Feature: gene Location: 318-1601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567-123 0 bp Feature: domain Description: GIIM Note: maturase Location: 1299-1512 bp Feature: domain Description: GIIM Note: maturase Location: 1299-1512 bp Feature: gene Location: 2231-2914 bp Feature: domain Description: YczE Location: 2288-2849 bp Feature: domain Description: YczE Location: 2288-2849 bp Feature: gene Location: 2913-3110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YczE (COG2364), RVT-GII, GIIM (pfam08388)

Seq: DMWP01000099.1 TPA_asm: Verrucomicrobia bacterium isolate UBA8416 contig_9732, whole genome shotgun sequence (3570 bp)
Overview 1 RT 1: 39-2280 bp Neighborhood of RT #1 [39, 2280] HRDC RVT-DGRs Feature: gene Location: 39-566 bp Feature: domain Description: HRDC Location: 321-516 bp Feature: domain Description: HRDC Location: 321-516 bp Feature: gene Location: 704-1564 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-1358 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 773-1358 bp Feature: gene Location: 1621-1980 bp Feature: gene Location: 2059-2280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs