myRT

myRT report for GCA_003483605.1_ASM348360v1

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Seq: DMYX01000072.1 TPA_asm: Alphaproteobacteria bacterium isolate UBA8363 contig_1058, whole genome shotgun sequence (45759 bp)
Overview 1 RT 1: 19440-30662 bp Neighborhood of RT #1 [19440, 30664] PRK12405 YhdJ YhdJ RVT-UG1 leuS Feature: gene Location: 19440-20042 bp Feature: domain Description: PRK12405 Location: 19443-20037 bp Feature: domain Description: PRK1 2405 Location: 1 9443-20037 bp Feature: gene Location: 20345-21628 bp Feature: domain Description: YhdJ Location: 20552-20645 bp Feature: domain Description: YhdJ Location: 20552-20645 bp Feature: domain Description: YhdJ Location: 21059-21200 bp Feature: domain Description: YhdJ Location: 21 059-21 200 bp Feature: gene Location: 21820-25701 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 22462-23008 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 22462-23008 bp Feature: gene Location: 25710-28052 bp Feature: gene Location: 28064-30664 bp Feature: domain Description: leuS Location: 28094-30662 bp Feature: domain Description: leuS Location: 28094-30662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12405 (electron transport complex RsxE subunit; Provisional), YhdJ (COG0863), RVT-UG1, leuS (PRK12300)

Seq: DMYX01000183.1 TPA_asm: Alphaproteobacteria bacterium isolate UBA8363 contig_687, whole genome shotgun sequence (14490 bp)
Overview 1 RT 1: 456-2877 bp Neighborhood of RT #1 [456, 2877] RVT-GII GIIM Feature: gene Location: 456-1787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1434 bp Feature: domain Description: GIIM Note: maturase Location: 1482-1680 bp Feature: domain Description: GIIM Note: maturase Location: 1482 -1680 bp Feature: gene Location: 1968-2591 bp Feature: gene Location: 2617-2877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: DMYX01000087.1 TPA_asm: Alphaproteobacteria bacterium isolate UBA8363 contig_952, whole genome shotgun sequence (10750 bp)
Overview 1 RT 1: 2-1030 bp Neighborhood of RT #1 [2, 1122] RVT-GII PemK_toxin PRK09974 Feature: gene Location: 2-247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-23 6 bp Feature: gene Location: 555-902 bp Feature: domain Description: PemK_toxin Location: 570-882 bp Feature: domain Description: PemK_toxin Location: 570-882 bp Feature: gene Location: 892-1122 bp Feature: domain Description: PRK09974 Location: 901-1030 bp Feature: domain Description: PRK09974 Location: 901-103 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PemK_toxin (pfam02452), PRK09974 (type II toxin-antitoxin system PrlF family antitoxin)