myRT

myRT report for GCA_003484425.1_ASM348442v1

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Seq: DNCU01000102.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10537 contig_14347, whole genome shotgun sequence (2872 bp)
Overview 1 RT 1: 2-2521 bp Neighborhood of RT #1 [2, 2538] Hrd RVT-DGRs YfmG YfmG Feature: gene Location: 2-292 bp Feature: domain Description: Hrd Location: 17-215 bp Feature: domain Description: Hrd Location: 1 7-21 5 bp Feature: gene Location: 289-1344 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 499-1087 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 499-1 087 bp Feature: gene Location: 1354-1569 bp Feature: domain Description: YfmG Location: 1402-1537 bp Feature: domain Description: YfmG Location: 1 402-1 537 bp Feature: gene Location: 1711-2538 bp Feature: domain Description: YfmG Location: 1852-2521 bp Feature: domain Description: YfmG Location: 1 852-2521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs

Seq: DNCU01000330.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10537 contig_44202, whole genome shotgun sequence (4628 bp)
Overview 1 RT 1: 2-3534 bp Neighborhood of RT #1 [2, 3545] STKc_PknB_like RVT-DGRs Avd_like Feature: gene Location: 2-1360 bp Feature: domain Description: STKc_PknB_like Location: 128-746 bp Feature: domain Description: STKc_PknB_like Location: 12 8-746 bp Feature: gene Location: 1419-1832 bp Feature: gene Location: 1998-2639 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2163-2412 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 163-2 412 bp Feature: gene Location: 2636-3019 bp Feature: gene Location: 3204-3545 bp Feature: domain Description: Avd_like Location: 3225-3534 bp Feature: domain Description: Avd_like Location: 32 2 5-3534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, STKc_PknB_like (cd14014), Avd_like (cd16376)

Seq: DNCU01000430.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10537 contig_5430, whole genome shotgun sequence (10038 bp)
Overview 1 RT 1: 7272-9928 bp Neighborhood of RT #1 [7272, 10035] RVT-Retrons KAS_III Feature: gene Location: 7272-7442 bp Feature: gene Location: 7423-7608 bp Feature: gene Location: 7670-9034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8192-8807 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8192-8807 bp Feature: gene Location: 9040-10035 bp Feature: domain Description: KAS_III Location: 9100-9928 bp Feature: domain Description: KAS_III Location: 9100-9928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, KAS_III (cd00830)