myRT

myRT report for GCA_003484695.1_ASM348469v1

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Seq: DNAZ01000008.1 TPA_asm: Candidatus Pacebacteria bacterium isolate UBA12472 contig_15564, whole genome shotgun sequence (66265 bp)
Overview 1 RT 1: 3-2636 bp Neighborhood of RT #1 [3, 2653] RVT-DGRs DUF1566 PEGA PEGA SH3_3 Feature: gene Location: 3-611 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42-333 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42-333 bp Feature: gene Location: 821-1672 bp Feature: domain Description: DUF1566 Location: 1259-1670 bp Feature: domain Description: DUF1 566 Location: 1 259-1 670 bp Feature: gene Location: 1712-2653 bp Feature: domain Description: PEGA Location: 1805-1970 bp Feature: domain Description: PEGA Location: 1 805-1 970 bp Feature: domain Description: PEGA Location: 2075-2273 bp Feature: domain Description: PEGA Location: 2075-2273 bp Feature: domain Description: SH3_3 Location: 2492-2636 bp Feature: domain Description: SH3_3 Location: 2492-2636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PEGA (pfam08308), SH3_3 (pfam08239), RVT-DGRs, DUF1566 (pfam07603)

Seq: DNAZ01000010.1 TPA_asm: Candidatus Pacebacteria bacterium isolate UBA12472 contig_25203, whole genome shotgun sequence (25041 bp)
Overview 1 RT 1: 20624-25004 bp Neighborhood of RT #1 [20624, 25039] FN3 FN3 Pur_ac_phosph_N FN3 FN3 Avd_like RVT-DGRs Feature: gene Location: 20624-23896 bp Feature: domain Description: FN3 Location: 22388-22589 bp Feature: domain Description: FN3 Location: 2 2 388-2 2 589 bp Feature: domain Description: FN3 Location: 22664-22889 bp Feature: domain Description: FN3 Location: 2 2 664-2 2 889 bp Feature: domain Description: Pur_ac_phosph_N Location: 22979-23201 bp Feature: domain Description: Pur_ac_phosph_N Location: 2 2 979-2 32 01 bp Feature: domain Description: FN3 Location: 23240-23453 bp Feature: domain Description: FN3 Location: 2 32 40-2 3453 bp Feature: domain Description: FN3 Location: 23582-23774 bp Feature: domain Description: FN3 Location: 2 3582 -2 3774 bp Feature: gene Location: 24148-24495 bp Feature: domain Description: Avd_like Location: 24184-24490 bp Feature: domain Description: Avd_like Location: 2 4184-2 4490 bp Feature: gene Location: 24488-25039 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24680-25004 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4680-2 5004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FN3 (smart00060), Pur_ac_phosph_N (pfam16656), Avd_like (cd16376), RVT-DGRs