myRT

myRT report for GCA_003484745.1_ASM348474v1

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Seq: DNAV01000091.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12278 contig_10297, whole genome shotgun sequence (10987 bp)
Overview 1 RT 1: 3-5240 bp Neighborhood of RT #1 [3, 5240] Phage_int_SAM_4 INT_ICEBs1_C_like RVT-DGRs Feature: gene Location: 3-1028 bp Feature: domain Description: Phage_int_SAM_4 Location: 186-399 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 86-399 bp Feature: domain Description: INT_ICEBs1_C_like Location: 489-1002 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 489-1 002 bp Feature: gene Location: 1559-1747 bp Feature: gene Location: 2076-3278 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2313-2922 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 231 3-2922 bp Feature: gene Location: 3533-4216 bp Feature: gene Location: 4299-5240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_ICEBs1_C_like (cd01189), RVT-DGRs

Seq: DNAV01000154.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12278 contig_6143, whole genome shotgun sequence (3767 bp)
Overview 1 RT 1: 138-3764 bp Neighborhood of RT #1 [138, 3764] RVT-DGRs Feature: gene Location: 138-1775 bp Feature: gene Location: 2123-2287 bp Feature: gene Location: 2387-3589 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2621-3209 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 62 1-32 09 bp Feature: gene Location: 3507-3764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: DNAV01000189.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12278 contig_7312, whole genome shotgun sequence (21117 bp)
Overview 1 RT 1: 18643-20684 bp Neighborhood of RT #1 [18643, 20689] eno RVT-GII Feature: gene Location: 18643-19962 bp Feature: domain Description: eno Location: 18661-19948 bp Feature: domain Description: eno Location: 18661-19948 bp Feature: gene Location: 20232-20390 bp Feature: gene Location: 20435-20689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-20684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-20684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eno (TIGR01060), RVT-GII

Seq: DNAV01000447.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12278 contig_7804, whole genome shotgun sequence (5544 bp)
Overview 1 RT 1: 1883-5543 bp Neighborhood of RT #1 [1883, 5542] RVT-GII GIIM Terminase_GpA Feature: gene Location: 1883-2260 bp Feature: gene Location: 2315-2452 bp Feature: gene Location: 2840-4138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3041-3659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304 1-3659 bp Feature: domain Description: GIIM Note: maturase Location: 3713-3923 bp Feature: domain Description: GIIM Note: maturase Location: 3713-3923 bp Feature: gene Location: 4489-4830 bp Feature: gene Location: 4685-5542 bp Feature: domain Description: Terminase_GpA Location: 4853-5543 bp Feature: domain Description: Terminase_GpA Location: 4 853-554 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Terminase_GpA (pfam05876)