myRT

myRT report for GCA_003486825.1_ASM348682v1

Download annotations/find similar RTs

Seq: DNFY01000392.1 TPA_asm: Desulfobacterales bacterium isolate UBA8913 contig_11454, whole genome shotgun sequence (16400 bp)
Overview 1 RT 1: 6657-11410 bp Neighborhood of RT #1 [6657, 11421] PRK08626 frdB RVT-DGRs Avd_like Feature: gene Location: 6657-8477 bp Feature: domain Description: PRK08626 Location: 6678-8451 bp Feature: domain Description: PRK08626 Location: 6678-8451 bp Feature: gene Location: 8490-9221 bp Feature: domain Description: frdB Location: 8499-9198 bp Feature: domain Description: frdB Location: 8499-91 98 bp Feature: gene Location: 9751-10791 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9964-10570 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9964-1 0570 bp Feature: gene Location: 10953-11093 bp Feature: gene Location: 11110-11421 bp Feature: domain Description: Avd_like Location: 11131-11410 bp Feature: domain Description: Avd_like Location: 1 1 1 31 -1 1 41 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08626 (fumarate reductase flavoprotein subunit; Provisional), frdB (PRK13552), RVT-DGRs, Avd_like (cd16376)

Seq: DNFY01000221.1 TPA_asm: Desulfobacterales bacterium isolate UBA8913 contig_140762, whole genome shotgun sequence (24408 bp)
Overview 1 RT 1: 500-5631 bp Neighborhood of RT #1 [500, 5631] Cas1_I-II-III RVT-CRISPR Feature: gene Location: 500-1501 bp Feature: domain Description: Cas1_I-II-III Location: 512-1454 bp Feature: domain Description: Cas1_I-II-III Location: 512 -1454 bp Feature: gene Location: 1863-2063 bp Feature: gene Location: 2140-3099 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2341-2944 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 341-2 944 bp Feature: gene Location: 3089-4123 bp Feature: gene Location: 4411-5631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: DNFY01000197.1 TPA_asm: Desulfobacterales bacterium isolate UBA8913 contig_163870, whole genome shotgun sequence (3264 bp)
Overview 1 RT 1: 1552-3094 bp Neighborhood of RT #1 [1552, 3261] DUF3795 CGGC RVT-GII GIIM Feature: gene Location: 1552-1959 bp Feature: domain Description: DUF3795 Location: 1573-1816 bp Feature: domain Description: DUF3 795 Location: 1573 -1816 bp Feature: gene Location: 1986-2393 bp Feature: domain Description: CGGC Location: 2001-2298 bp Feature: domain Description: CGGC Location: 2001-2298 bp Feature: gene Location: 2611-3261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2617-2815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2617-2815 bp Feature: domain Description: GIIM Note: maturase Location: 2866-3094 bp Feature: domain Description: GIIM Note: maturase Location: 2866-3 094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3795 (pfam12675), CGGC (smart01078), RVT-GII, GIIM (pfam08388)

Seq: DNFY01000047.1 TPA_asm: Desulfobacterales bacterium isolate UBA8913 contig_293612, whole genome shotgun sequence (4485 bp)
Overview 1 RT 1: 1029-3747 bp Neighborhood of RT #1 [1029, 4127] RVT-GII COG4584 COG4584 Feature: gene Location: 1029-1337 bp Feature: gene Location: 1376-2002 bp Feature: gene Location: 1943-3010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2045-2735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204 5-2735 bp Feature: gene Location: 3123-4127 bp Feature: domain Description: COG4584 Location: 3264-3414 bp Feature: domain Description: COG4 584 Location: 3264 -34 14 bp Feature: domain Description: COG4584 Location: 3426-3747 bp Feature: domain Description: COG4 584 Location: 34 26-374 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG4584 (Transposase )