myRT

myRT report for GCA_003487685.1_ASM348768v1

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Seq: DNFJ01000111.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_18, whole genome shotgun sequence (103905 bp)
Overview 1 RT 1: 101784-103746 bp Neighborhood of RT #1 [101784, 103904] Xcc1710_like CE4_ArnD RVT-GII GIIM Feature: gene Location: 101784-102155 bp Feature: domain Description: Xcc1710_like Location: 101823-102147 bp Feature: domain Description: Xcc1 71 0_like Location: 1 01 823-1 021 47 bp Feature: gene Location: 102174-103112 bp Feature: domain Description: CE4_ArnD Location: 102219-103050 bp Feature: domain Description: CE4_ArnD Location: 1 0221 9-1 03050 bp Feature: gene Location: 103173-103904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103248-103485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 03248-1 03485 bp Feature: domain Description: GIIM Note: maturase Location: 103548-103746 bp Feature: domain Description: GIIM Note: maturase Location: 1 03548-1 03746 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Xcc1710_like (cd05560), CE4_ArnD (cd10939), RVT-GII, GIIM (pfam08388)

Seq: DNFJ01000012.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_2397, whole genome shotgun sequence (2533 bp)
Overview 1 RT 1: 3-2456 bp Neighborhood of RT #1 [3, 2456] HTH_17 HTH_17 RVT-GII Feature: gene Location: 3-1157 bp Feature: domain Description: HTH_17 Location: 819-891 bp Feature: domain Description: HTH_17 Location: 819-891 bp Feature: domain Description: HTH_17 Location: 1002-1119 bp Feature: domain Description: HTH_17 Location: 1002 -1119 bp Feature: gene Location: 1169-1369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1175-1361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1175-1361 bp Feature: gene Location: 1726-2058 bp Feature: gene Location: 2289-2456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_17 (pfam12728)

Seq: DNFJ01000290.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_253, whole genome shotgun sequence (11911 bp)
Overview 1 RT 1: 5026-10651 bp Neighborhood of RT #1 [5026, 10794] YfmG Hrd RVT-DGRs YfmG YfmG Feature: gene Location: 5026-7947 bp Feature: domain Description: YfmG Location: 7114-7780 bp Feature: domain Description: YfmG Location: 7114-7780 bp Feature: gene Location: 7956-8462 bp Feature: domain Description: Hrd Location: 8196-8406 bp Feature: domain Description: Hrd Location: 8196-8406 bp Feature: gene Location: 8504-9517 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8711-9302 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8711-93 02 bp Feature: gene Location: 9514-9834 bp Feature: domain Description: YfmG Location: 9538-9700 bp Feature: domain Description: YfmG Location: 953 8-9700 bp Feature: gene Location: 9847-10794 bp Feature: domain Description: YfmG Location: 9985-10651 bp Feature: domain Description: YfmG Location: 9985-10651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs

Seq: DNFJ01000274.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_509, whole genome shotgun sequence (14655 bp)
Overview 1 RT 1: 7164-9834 bp Neighborhood of RT #1 [7164, 9834] SGNH_hydrolase RVT-GII Feature: gene Location: 7164-7307 bp Feature: gene Location: 7561-8361 bp Feature: domain Description: SGNH_hydrolase Location: 7627-8317 bp Feature: domain Description: SGNH_hydrolase Location: 7627-8317 bp Feature: gene Location: 8358-9218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8670-8895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8670-8895 bp Feature: gene Location: 9418-9648 bp Feature: gene Location: 9700-9834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGNH_hydrolase (cl01053), RVT-GII

Seq: DNFJ01000200.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_738, whole genome shotgun sequence (7823 bp)
Overview 1 RT 1: 4970-7770 bp Neighborhood of RT #1 [4970, 7820] Mtu_PIN_fam YccA_like RVT-GII Feature: gene Location: 4970-5407 bp Feature: domain Description: Mtu_PIN_fam Location: 5021-5381 bp Feature: domain Description: Mtu_PIN_fam Location: 5 021-5 381 bp Feature: gene Location: 5916-6608 bp Feature: domain Description: YccA_like Location: 5970-6597 bp Feature: domain Description: YccA_like Location: 5 970-65 97 bp Feature: gene Location: 7032-7820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7374-7770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7374-7770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mtu_PIN_fam (TIGR00028), YccA_like (cd10433), RVT-GII

Seq: DNFJ01000225.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_8133, whole genome shotgun sequence (2978 bp)
Overview 1 RT 1: 1-2947 bp Neighborhood of RT #1 [1, 2976] RVT-DGRs pfam03781 Feature: gene Location: 1-912 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16-598 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16 -598 bp Feature: gene Location: 1282-2976 bp Feature: domain Description: pfam03781 Location: 2332-2947 bp Feature: domain Description: pfam03781 Location: 2332-2947 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs

Seq: DNFJ01000216.1 TPA_asm: Candidatus Accumulibacter sp. isolate UBA8770 contig_927, whole genome shotgun sequence (4043 bp)
Overview 1 RT 1: 1-3926 bp Neighborhood of RT #1 [1, 3952] FGE-sulfatase RVT-DGRs Avd_like YfmG Feature: gene Location: 1-909 bp Feature: domain Description: FGE-sulfatase Location: 211-880 bp Feature: domain Description: FGE-sulfatase Location: 211-880 bp Feature: gene Location: 999-2060 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1197-1845 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1197 -1845 bp Feature: gene Location: 2164-2565 bp Feature: domain Description: Avd_like Location: 2191-2503 bp Feature: domain Description: Avd_like Location: 2191-2503 bp Feature: gene Location: 3170-3952 bp Feature: domain Description: YfmG Location: 3191-3926 bp Feature: domain Description: YfmG Location: 3191-3926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), YfmG (COG1262), RVT-DGRs