myRT

myRT report for GCA_003488685.1_ASM348868v1

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Seq: DNKT01000047.1 TPA_asm: Geobacter sulfurreducens isolate UBA9565 contig_4896, whole genome shotgun sequence (30099 bp)
Overview 1 RT 1: 26610-29820 bp Neighborhood of RT #1 [26610, 30020] RAYT Bac_DnaA_C RVT-GII GIIM Feature: gene Location: 26610-27554 bp Feature: domain Description: RAYT Location: 26619-26964 bp Feature: domain Description: RAYT Location: 2661 9-26964 bp Feature: domain Description: Bac_DnaA_C Location: 27282-27477 bp Feature: domain Description: Bac_DnaA_C Location: 27282-27477 bp Feature: gene Location: 28534-28662 bp Feature: gene Location: 28680-30020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28956-29571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28956-29571 bp Feature: domain Description: GIIM Note: maturase Location: 29616-29820 bp Feature: domain Description: GIIM Note: maturase Location: 2961 6-29820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), Bac_DnaA_C (smart00760), RVT-GII, GIIM (pfam08388)

Seq: DNKT01000031.1 TPA_asm: Geobacter sulfurreducens isolate UBA9565 contig_598, whole genome shotgun sequence (68470 bp)
Overview 1 RT 1: 62330-68460 bp Neighborhood of RT #1 [62330, 68468] Methyltransf_25 Methyltransf_25 COG4190 RVT-UG12 TIR_2 Piwi_piwi-like_ProArk Feature: gene Location: 62330-63553 bp Feature: domain Description: Methyltransf_25 Location: 62402-62516 bp Feature: domain Description: Methyltransf_2 5 Location: 62 402 -62 516 bp Feature: domain Description: Methyltransf_25 Location: 62585-62762 bp Feature: domain Description: Methyltransf_2 5 Location: 62 585-62 762 bp Feature: gene Location: 63447-63896 bp Feature: domain Description: COG4190 Location: 63558-63864 bp Feature: domain Description: COG4190 Location: 63558-63864 bp Feature: gene Location: 64120-65658 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 64447-64912 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 64447-64912 bp Feature: gene Location: 65741-67156 bp Feature: domain Description: TIR_2 Location: 65774-66086 bp Feature: domain Description: TIR_2 Location: 65774-66086 bp Feature: gene Location: 67149-68468 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 67179-68460 bp Feature: domain Description: Piwi_piwi-like_ProArk Location: 67179-68460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), COG4190 (Predicted transcriptional regulator ), RVT-UG12, TIR_2 (pfam13676), Piwi_piwi-like_ProArk (cd04659)