myRT

myRT report for GCA_003488745.1_ASM348874v1

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Seq: DNKO01000050.1 TPA_asm: Lentisphaeria bacterium isolate UBA12469 contig_2322, whole genome shotgun sequence (82705 bp)
Overview 1 RT 1: 74019-77783 bp Neighborhood of RT #1 [74019, 77959] MngR PBP2_UgpB YncB RVT-Retrons Prok-E2_D Feature: gene Location: 74019-75428 bp Feature: domain Description: MngR Location: 74034-74232 bp Feature: domain Description: MngR Location: 74034-74232 bp Feature: domain Description: PBP2_UgpB Location: 74388-75369 bp Feature: domain Description: PBP2_UgpB Location: 74388-75369 bp Feature: gene Location: 75608-75781 bp Feature: domain Description: YncB Location: 75617-75767 bp Feature: domain Description: YncB Location: 7561 7-75767 bp Feature: gene Location: 75971-76828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76004-76562 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76004-76562 bp Feature: gene Location: 76937-77164 bp Feature: gene Location: 77279-77959 bp Feature: domain Description: Prok-E2_D Location: 77384-77783 bp Feature: domain Description: Prok-E2_D Location: 77384-77783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MngR (COG2188), PBP2_UgpB (cd14748), YncB (COG1525), RVT-Retrons, Prok-E2_D (pfam14460)

Seq: DNKO01000108.1 TPA_asm: Lentisphaeria bacterium isolate UBA12469 contig_5265, whole genome shotgun sequence (102226 bp)
Overview 1 RT 1: 72768-76718 bp Neighborhood of RT #1 [72768, 76718] DDE_Tnp_1 RVT-Retrons Feature: gene Location: 72768-73289 bp Feature: domain Description: DDE_Tnp_1 Location: 72855-73002 bp Feature: domain Description: DDE_Tnp_1 Location: 72 855-73002 bp Feature: gene Location: 73749-73934 bp Feature: gene Location: 74348-75220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74474-74987 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74474-74987 bp Feature: gene Location: 75402-76178 bp Feature: gene Location: 76344-76718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-Retrons

Seq: DNKO01000131.1 TPA_asm: Lentisphaeria bacterium isolate UBA12469 contig_991, whole genome shotgun sequence (61861 bp)
Overview 1 RT 1: 36294-43982 bp Neighborhood of RT #1 [36294, 43982] PMT_2 TPR TPR_2 RVT-Retrons SSL2 SSL2 MPH1 SSL2 Feature: gene Location: 36294-37919 bp Feature: gene Location: 37968-39689 bp Feature: domain Description: PMT_2 Location: 38187-38604 bp Feature: domain Description: PMT_2 Location: 3 8187-3 8604 bp Feature: domain Description: TPR Location: 39297-39510 bp Feature: domain Description: TPR Location: 3 9297-3 9510 bp Feature: domain Description: TPR_2 Location: 39549-39636 bp Feature: domain Description: TPR_2 Location: 3 9549-3 963 6 bp Feature: gene Location: 40259-41305 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40556-41102 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40556-41102 bp Feature: gene Location: 41306-43207 bp Feature: domain Description: SSL2 Location: 41318-41693 bp Feature: domain Description: SSL2 Location: 413 18-41693 bp Feature: domain Description: SSL2 Location: 41852-42194 bp Feature: domain Description: SSL2 Location: 41852-42194 bp Feature: domain Description: MPH1 Location: 42557-42707 bp Feature: domain Description: MPH1 Location: 42557-42707 bp Feature: domain Description: SSL2 Location: 42971-43136 bp Feature: domain Description: SSL2 Location: 42971-43 13 6 bp Feature: gene Location: 43188-43982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PMT_2 (pfam13231), TPR (smart00028), TPR_2 (pfam07719), RVT-Retrons, SSL2 (COG1061), MPH1 (COG1111)