myRT

myRT report for GCA_003488785.1_ASM348878v1

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Seq: DNKK01000053.1 TPA_asm: Geobacter sp. isolate UBA12467 contig_36407, whole genome shotgun sequence (19063 bp)
Overview 1 RT 1: 652-4669 bp Neighborhood of RT #1 [652, 4959] HTH_37 TPR RVT-GII GIIM TPR VCBS Feature: gene Location: 652-954 bp Feature: domain Description: HTH_37 Location: 748-919 bp Feature: domain Description: HTH_37 Location: 748-91 9 bp Feature: gene Location: 1131-1736 bp Feature: domain Description: TPR Location: 1248-1512 bp Feature: domain Description: TPR Location: 1 248-1 51 2 bp Feature: gene Location: 1831-3231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2167-2785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 67-2785 bp Feature: domain Description: GIIM Note: maturase Location: 2839-3049 bp Feature: domain Description: GIIM Note: maturase Location: 2839-3049 bp Feature: gene Location: 3642-3785 bp Feature: gene Location: 3865-4959 bp Feature: domain Description: TPR Location: 3964-4288 bp Feature: domain Description: TPR Location: 3964-4288 bp Feature: domain Description: VCBS Location: 4543-4669 bp Feature: domain Description: VCBS Location: 4543-4669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), RVT-GII, GIIM (pfam08388), VCBS (pfam13517), HTH_37 (pfam13744)

Seq: DNKK01000050.1 TPA_asm: Geobacter sp. isolate UBA12467 contig_6588, whole genome shotgun sequence (20488 bp)
Overview 1 RT 1: 8686-14554 bp Neighborhood of RT #1 [8686, 15171] RVT_N RVT-GII GIIM DEXDc Z1 Feature: gene Location: 8686-9618 bp Feature: gene Location: 10021-10251 bp Feature: gene Location: 10436-11908 bp Feature: RT Description: RVT_N Location: 10490-10733 bp Feature: RT Description: RVT_N Location: 10490-10733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10778-11402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10778-11402 bp Feature: domain Description: GIIM Note: maturase Location: 11456-11687 bp Feature: domain Description: GIIM Note: maturase Location: 11456-11687 bp Feature: gene Location: 12071-12928 bp Feature: gene Location: 13054-15171 bp Feature: domain Description: DEXDc Location: 13144-13711 bp Feature: domain Description: DEXDc Location: 13144-13711 bp Feature: domain Description: Z1 Location: 13927-14554 bp Feature: domain Description: Z1 Location: 1392 7-14554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DEXDc (smart00487), Z1 (pfam10593)