myRT

myRT report for GCA_003488845.1_ASM348884v1

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Seq: DNKG01000175.1 TPA_asm: Clostridiales bacterium isolate UBA12268 contig_2400, whole genome shotgun sequence (4171 bp)
Overview 1 RT 1: 1-3660 bp Neighborhood of RT #1 [1, 3683] Avd_like RVT-DGRs YafY Feature: gene Location: 1-456 bp Feature: gene Location: 545-907 bp Feature: domain Description: Avd_like Location: 572-884 bp Feature: domain Description: Avd_like Location: 572-884 bp Feature: gene Location: 943-1899 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1099-1705 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 099-1 705 bp Feature: gene Location: 2525-3004 bp Feature: gene Location: 3141-3683 bp Feature: domain Description: YafY Location: 3144-3660 bp Feature: domain Description: YafY Location: 31 44-3660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), Avd_like (cd16376), RVT-DGRs

Seq: DNKG01000184.1 TPA_asm: Clostridiales bacterium isolate UBA12268 contig_259, whole genome shotgun sequence (3000 bp)
Overview 1 RT 1: 124-2646 bp Neighborhood of RT #1 [124, 2858] spore_0_A Avd_like RVT-DGRs Feature: gene Location: 124-849 bp Feature: domain Description: spore_0_A Location: 136-613 bp Feature: domain Description: spore_0_A Location: 136-613 bp Feature: gene Location: 878-1459 bp Feature: domain Description: Avd_like Location: 1103-1430 bp Feature: domain Description: Avd_like Location: 1103-1430 bp Feature: gene Location: 1833-2858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2028-2646 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 02 8-2 646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spore_0_A (TIGR02875), RVT-DGRs, Avd_like (cd16376)

Seq: DNKG01000139.1 TPA_asm: Clostridiales bacterium isolate UBA12268 contig_3862, whole genome shotgun sequence (5411 bp)
Overview 1 RT 1: 1-1271 bp Neighborhood of RT #1 [1, 1504] RVT-DGRs Avd_like MutS_I Feature: gene Location: 1-267 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28-220 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28-220 bp Feature: gene Location: 703-1077 bp Feature: domain Description: Avd_like Location: 736-1039 bp Feature: domain Description: Avd_like Location: 73 6-103 9 bp Feature: gene Location: 1067-1504 bp Feature: domain Description: MutS_I Location: 1091-1271 bp Feature: domain Description: MutS_I Location: 1091-1271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), RVT-DGRs, Avd_like (cd16376)

Seq: DNKG01000169.1 TPA_asm: Clostridiales bacterium isolate UBA12268 contig_778, whole genome shotgun sequence (9087 bp)
Overview 1 RT 1: 5766-8496 bp Neighborhood of RT #1 [5766, 8654] mutL dinD RVT-DGRs Feature: gene Location: 5766-6365 bp Feature: domain Description: mutL Location: 5775-6357 bp Feature: domain Description: mutL Location: 5775-6357 bp Feature: gene Location: 7347-8174 bp Feature: domain Description: dinD Location: 7368-8163 bp Feature: domain Description: dinD Location: 7368-8163 bp Feature: gene Location: 8259-8654 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8265-8496 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8265-84 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutL (PRK00095), dinD (PRK11525), RVT-DGRs