myRT

myRT report for GCA_003488965.1_ASM348896v1

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Seq: DNJW01000315.1 TPA_asm: Lachnospiraceae bacterium isolate UBA11962 contig_10567, whole genome shotgun sequence (23353 bp)
Overview 1 RT 1: 6389-10744 bp Neighborhood of RT #1 [6389, 10744] Uup Uup RVT-Retrons Feature: gene Location: 6389-7936 bp Feature: domain Description: Uup Location: 6407-6581 bp Feature: domain Description: Uup Location: 6407-6581 bp Feature: domain Description: Uup Location: 6653-7931 bp Feature: domain Description: Uup Location: 6653-7931 bp Feature: gene Location: 8008-8247 bp Feature: gene Location: 8267-9331 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8480-9080 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8480-9080 bp Feature: gene Location: 9418-9774 bp Feature: gene Location: 9740-10744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uup (COG0488), RVT-Retrons

Seq: DNJW01000127.1 TPA_asm: Lachnospiraceae bacterium isolate UBA11962 contig_15800, whole genome shotgun sequence (13557 bp)
Overview 1 RT 1: 5228-10851 bp Neighborhood of RT #1 [5228, 13556] Methyltransf_25 PLDc_N_DEXD_b3 SSL2 dnaG RVT-UNC Feature: gene Location: 5228-5839 bp Feature: domain Description: Methyltransf_25 Location: 5375-5639 bp Feature: domain Description: Methyltransf_2 5 Location: 5375-5639 bp Feature: gene Location: 5809-8292 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 5908-6325 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 5908-632 5 bp Feature: domain Description: SSL2 Location: 6388-7510 bp Feature: domain Description: SSL2 Location: 6388-7510 bp Feature: gene Location: 8412-13556 bp Feature: domain Description: dnaG Location: 8457-9552 bp Feature: domain Description: dnaG Location: 8457-9552 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 10248-10851 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 102 48-10851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), PLDc_N_DEXD_b3 (cd09205), SSL2 (COG1061), dnaG (TIGR01391), RVT-UG10/RVT-UG1/RVT-DGRs/RVT-UG2(RVT-UNC)