myRT

myRT report for GCA_003489865.1_ASM348986v1

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Seq: DNKJ01000072.1 TPA_asm: Verrucomicrobia bacterium isolate UBA12460 contig_28489, whole genome shotgun sequence (28858 bp)
Overview 1 RT 1: 25439-28794 bp Neighborhood of RT #1 [25439, 28856] pfam03781 RVT-GII Y1_Tnp Feature: gene Location: 25439-26506 bp Feature: domain Description: pfam03781 Location: 25655-26498 bp Feature: domain Description: pfam03781 Location: 25655-26498 bp Feature: gene Location: 26587-27123 bp Feature: gene Location: 27440-28261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27929-28256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27929-28256 bp Feature: gene Location: 28334-28558 bp Feature: gene Location: 28623-28856 bp Feature: domain Description: Y1_Tnp Location: 28632-28794 bp Feature: domain Description: Y1 _Tnp Location: 28632-28794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-GII, Y1_Tnp (pfam01797)

Seq: DNKJ01000035.1 TPA_asm: Verrucomicrobia bacterium isolate UBA12460 contig_4399, whole genome shotgun sequence (119255 bp)
Overview 1 RT 1: 61031-64754 bp Neighborhood of RT #1 [61031, 64754] RVT_N RVT-GII GIIM Feature: gene Location: 61031-61195 bp Feature: gene Location: 61377-61727 bp Feature: gene Location: 62415-63908 bp Feature: RT Description: RVT_N Location: 62481-62715 bp Feature: RT Description: RVT_N Location: 62 481-62 715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62772-63390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 772 -63390 bp Feature: domain Description: GIIM Note: maturase Location: 63450-63678 bp Feature: domain Description: GIIM Note: maturase Location: 63450-63678 bp Feature: gene Location: 64154-64495 bp Feature: gene Location: 64533-64754 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)