myRT

myRT report for GCA_003499505.1_ASM349950v1

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Seq: DNTC01000031.1 TPA_asm: Desulfofustis sp. isolate UBA10421 contig_1186, whole genome shotgun sequence (10101 bp)
Overview 1 RT 1: 3-3274 bp Neighborhood of RT #1 [3, 3274] KOG0460 RVT-GII GIIM Feature: gene Location: 3-599 bp Feature: domain Description: KOG0460 Location: 9-600 bp Feature: domain Description: KOG0460 Location: 9-600 bp Feature: gene Location: 1045-1230 bp Feature: gene Location: 1389-2705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605-2226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 605-2226 bp Feature: domain Description: GIIM Note: maturase Location: 2274-2493 bp Feature: domain Description: GIIM Note: maturase Location: 2274-2493 bp Feature: gene Location: 2754-2927 bp Feature: gene Location: 2978-3274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0460 (KOG0460, Mitochondrial translation elongation factor Tu ), RVT-GII, GIIM (pfam08388)

Seq: DNTC01000324.1 TPA_asm: Desulfofustis sp. isolate UBA10421 contig_2700, whole genome shotgun sequence (2887 bp)
Overview 1 RT 1: 2-2874 bp Neighborhood of RT #1 [2, 2885] group_II_RT_mat RVT-UG19 RMtype1_S_EcoAO83I-TRD1-CR1_like RMtype1_S_EcoAO83I-TRD1-CR1_like HsdM Feature: gene Location: 2-1255 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 110-290 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 110-2 90 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 365-839 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 365-839 bp Feature: gene Location: 1279-2331 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 1300-1768 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 1300-1768 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 1852-2305 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 1852 -2 305 bp Feature: gene Location: 2328-2885 bp Feature: domain Description: HsdM Location: 2370-2874 bp Feature: domain Description: HsdM Location: 2 370-2 874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-UG19, RMtype1_S_EcoAO83I-TRD1-CR1_like (cd17267), HsdM (COG0286)