myRT

myRT report for GCA_003501765.1_ASM350176v1

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Seq: DNOY01000168.1 TPA_asm: Cyanobacteria bacterium UBA11367 contig_10186, whole genome shotgun sequence (3781 bp)
Overview 1 RT 1: 143-3678 bp Neighborhood of RT #1 [143, 3692] YggE PRK07459 RVT_N RVT-GII GIIM PRK07459 Feature: gene Location: 143-874 bp Feature: domain Description: YggE Location: 191-872 bp Feature: domain Description: YggE Location: 1 91 -872 bp Feature: gene Location: 963-1106 bp Feature: domain Description: PRK07459 Location: 966-1080 bp Feature: domain Description: PRK07459 Location: 966-1 080 bp Feature: gene Location: 1258-2955 bp Feature: domain Description: RVT_N Location: 1300-1546 bp Feature: domain Description: RVT_N Location: 1 300-1 546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1588-2263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 588-2263 bp Feature: domain Description: GIIM Note: maturase Location: 2335-2563 bp Feature: domain Description: GIIM Note: maturase Location: 2335-2563 bp Feature: gene Location: 3528-3692 bp Feature: domain Description: PRK07459 Location: 3531-3678 bp Feature: domain Description: PRK07459 Location: 3531 -3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YggE (COG2968), PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: DNOY01000024.1 TPA_asm: Cyanobacteria bacterium UBA11367 contig_2017, whole genome shotgun sequence (3916 bp)
Overview 1 RT 1: 299-3599 bp Neighborhood of RT #1 [299, 3610] RVT_N RVT-GII GIIM McrA InsQ Feature: gene Location: 299-637 bp Feature: gene Location: 894-2786 bp Feature: domain Description: RVT_N Location: 939-1185 bp Feature: domain Description: RVT_N Location: 939-1185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227-1926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 7-192 6 bp Feature: domain Description: GIIM Note: maturase Location: 2031-2262 bp Feature: domain Description: GIIM Note: maturase Location: 2 031-2 2 62 bp Feature: domain Description: McrA Location: 2367-2664 bp Feature: domain Description: McrA Location: 2 367-2 664 bp Feature: gene Location: 2881-3051 bp Feature: gene Location: 3104-3610 bp Feature: domain Description: InsQ Location: 3125-3599 bp Feature: domain Description: InsQ Location: 312 5-3599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), InsQ (COG0675)

Seq: DNOY01000427.1 TPA_asm: Cyanobacteria bacterium UBA11367 contig_2785, whole genome shotgun sequence (27374 bp)
Overview 1 RT 1: 3621-6105 bp Neighborhood of RT #1 [3621, 6105] RVT-UG7 Feature: gene Location: 3621-3842 bp Feature: gene Location: 3820-4077 bp Feature: gene Location: 4085-4786 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4496-4778 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 4496-4778 bp Feature: gene Location: 4954-5328 bp Feature: gene Location: 5854-6105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: DNOY01000614.1 TPA_asm: Cyanobacteria bacterium UBA11367 contig_6397, whole genome shotgun sequence (21472 bp)
Overview 1 RT 1: 13431-18122 bp Neighborhood of RT #1 [13431, 18127] Rnc RVT-Retrons LCIB_C_CA PRK10841 BaeS Feature: gene Location: 13431-14117 bp Feature: domain Description: Rnc Location: 13446-14103 bp Feature: domain Description: Rnc Location: 134 4 6-14 103 bp Feature: gene Location: 14162-14302 bp Feature: gene Location: 14315-15724 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14861-15479 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14 861-154 79 bp Feature: gene Location: 15854-16654 bp Feature: domain Description: LCIB_C_CA Location: 15968-16604 bp Feature: domain Description: LCIB_C_CA Location: 15968-16604 bp Feature: gene Location: 16832-18127 bp Feature: domain Description: PRK10841 Location: 16856-17192 bp Feature: domain Description: PRK1084 1 Location: 16856-17192 bp Feature: domain Description: BaeS Location: 17201-18122 bp Feature: domain Description: BaeS Location: 17201-18122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnc (COG0571), RVT-Retrons, LCIB_C_CA (pfam18599), PRK10841 (two-component system sensor histidine kinase RcsC), BaeS (COG0642)