myRT

myRT report for GCA_003501785.1_ASM350178v1

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Seq: DNOW01000684.1 TPA_asm: Cyanobacteria bacterium UBA11368 contig_1385, whole genome shotgun sequence (53541 bp)
Overview 1 RT 1: 46791-52311 bp Neighborhood of RT #1 [46791, 52311] ProV RVT-GII Intron_maturas2 HNHc Feature: gene Location: 46791-47999 bp Feature: domain Description: ProV Location: 46812-47973 bp Feature: domain Description: ProV Location: 4681 2-47973 bp Feature: gene Location: 48152-48853 bp Feature: gene Location: 49365-51326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49776-50571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49776-50571 bp Feature: domain Description: Intron_maturas2 Location: 50673-50910 bp Feature: domain Description: Intron_maturas2 Location: 50673-5091 0 bp Feature: domain Description: HNHc Note: nucleases Location: 51069-51258 bp Feature: domain Description: HNHc Note: nucleases Location: 51 069-51 258 bp Feature: gene Location: 51740-51868 bp Feature: gene Location: 52150-52311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ProV (COG4175), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DNOW01000058.1 TPA_asm: Cyanobacteria bacterium UBA11368 contig_1519, whole genome shotgun sequence (17588 bp)
Overview 1 RT 1: 9648-17507 bp Neighborhood of RT #1 [9648, 17515] InsQ InsQ RVT_N RVT-GII McrA InsQ TPR Spy Feature: gene Location: 9648-9794 bp Feature: gene Location: 9833-11560 bp Feature: domain Description: InsQ Location: 9878-10043 bp Feature: domain Description: InsQ Location: 9878-10043 bp Feature: domain Description: InsQ Location: 10283-11453 bp Feature: domain Description: InsQ Location: 102 83-11453 bp Feature: gene Location: 12231-13862 bp Feature: RT Description: RVT_N Location: 12267-12498 bp Feature: RT Description: RVT_N Location: 12 2 67-12 498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12564-13221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 564-132 2 1 bp Feature: domain Description: McrA Location: 13455-13776 bp Feature: domain Description: McrA Location: 13455-13776 bp Feature: gene Location: 14073-15197 bp Feature: domain Description: InsQ Location: 14085-15057 bp Feature: domain Description: InsQ Location: 14085-15057 bp Feature: gene Location: 15317-17515 bp Feature: domain Description: TPR Location: 15326-15524 bp Feature: domain Description: TPR Location: 1532 6-1552 4 bp Feature: domain Description: Spy Location: 15599-17507 bp Feature: domain Description: Spy Location: 15599-17507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), InsQ (COG0675), TPR (smart00028), Spy (COG3914)

Seq: DNOW01000373.1 TPA_asm: Cyanobacteria bacterium UBA11368 contig_1654, whole genome shotgun sequence (5362 bp)
Overview 1 RT 1: 3-3470 bp Neighborhood of RT #1 [3, 3787] TPR RVT-Retrons Rnc NYN Feature: gene Location: 3-332 bp Feature: domain Description: TPR Location: 12-153 bp Feature: domain Description: TPR Location: 12-153 bp Feature: gene Location: 673-2085 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1225-1843 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1225-1843 bp Feature: gene Location: 2200-2913 bp Feature: domain Description: Rnc Location: 2245-2899 bp Feature: domain Description: Rnc Location: 2245-2899 bp Feature: gene Location: 3017-3787 bp Feature: domain Description: NYN Location: 3077-3470 bp Feature: domain Description: NYN Location: 3 077-3 470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnc (COG0571), NYN (pfam01936), TPR (smart00028), RVT-Retrons

Seq: DNOW01000822.1 TPA_asm: Cyanobacteria bacterium UBA11368 contig_4136, whole genome shotgun sequence (4860 bp)
Overview 1 RT 1: 2-1339 bp Neighborhood of RT #1 [2, 1339] RVT_N RVT-GII Feature: gene Location: 2-823 bp Feature: RT Description: RVT_N Location: 26-221 bp Feature: RT Description: RVT_N Location: 26-221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263-812 bp Feature: gene Location: 736-942 bp Feature: gene Location: 1208-1339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: DNOW01000547.1 TPA_asm: Cyanobacteria bacterium UBA11368 contig_507, whole genome shotgun sequence (8114 bp)
Overview 1 RT 1: 2417-6850 bp Neighborhood of RT #1 [2417, 6850] Y1_Tnp InsQ RVT_N RVT-GII GIIM McrA Feature: gene Location: 2417-2830 bp Feature: domain Description: Y1_Tnp Location: 2453-2813 bp Feature: domain Description: Y1_Tnp Location: 245 3-2813 bp Feature: gene Location: 2905-4278 bp Feature: domain Description: InsQ Location: 2908-4168 bp Feature: domain Description: InsQ Location: 2908-4168 bp Feature: gene Location: 4566-6290 bp Feature: RT Description: RVT_N Location: 4782-5028 bp Feature: RT Description: RVT_N Location: 4782-5 028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5079-5706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 079-5 706 bp Feature: domain Description: GIIM Note: maturase Location: 5763-5955 bp Feature: domain Description: GIIM Note: maturase Location: 5 763-5 95 5 bp Feature: domain Description: McrA Location: 5970-6261 bp Feature: domain Description: McrA Location: 5 970-6261 bp Feature: gene Location: 6306-6479 bp Feature: gene Location: 6497-6850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)