myRT

myRT report for GCA_003504865.1_ASM350486v1

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Seq: DNZA01000584.1 TPA_asm: Cyanobacteria bacterium UBA11162 contig_10005, whole genome shotgun sequence (4550 bp)
Overview 1 RT 1: 412-4486 bp Neighborhood of RT #1 [412, 4486] DDE_Tnp_1 RVT_N RVT-GII GIIM McrA Feature: gene Location: 412-1236 bp Feature: domain Description: DDE_Tnp_1 Location: 823-1219 bp Feature: domain Description: DDE_Tnp_1 Location: 823-1 21 9 bp Feature: gene Location: 1337-1483 bp Feature: gene Location: 1837-3639 bp Feature: domain Description: RVT_N Location: 1873-2119 bp Feature: domain Description: RVT_N Location: 1 873-21 1 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2161-2842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 61 -2842 bp Feature: domain Description: GIIM Note: maturase Location: 2953-3175 bp Feature: domain Description: GIIM Note: maturase Location: 2953-31 75 bp Feature: domain Description: McrA Location: 3250-3538 bp Feature: domain Description: McrA Location: 3250-3538 bp Feature: gene Location: 3900-4070 bp Feature: gene Location: 4277-4486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: DNZA01000006.1 TPA_asm: Cyanobacteria bacterium UBA11162 contig_66705, whole genome shotgun sequence (3881 bp)
Overview 1 RT 1: 166-3197 bp Neighborhood of RT #1 [166, 3197] RVT_N RVT-GII GIIM McrA Feature: gene Location: 166-1863 bp Feature: domain Description: RVT_N Location: 208-454 bp Feature: domain Description: RVT_N Location: 2 08-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496-1165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 496-1165 bp Feature: domain Description: GIIM Note: maturase Location: 1264-1462 bp Feature: domain Description: GIIM Note: maturase Location: 12 64-1462 bp Feature: domain Description: McrA Location: 1564-1834 bp Feature: domain Description: McrA Location: 1564-1834 bp Feature: gene Location: 2090-2245 bp Feature: gene Location: 2703-3197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: DNZA01000557.1 TPA_asm: Cyanobacteria bacterium UBA11162 contig_7269, whole genome shotgun sequence (10200 bp)
Overview 1 RT 1: 6305-10025 bp Neighborhood of RT #1 [6305, 10066] PRK13877 Relaxase RVT-CRISPR Cas1_I-II-III Feature: gene Location: 6305-6655 bp Feature: domain Description: PRK13877 Location: 6317-6563 bp Feature: domain Description: PRK13 877 Location: 63 17-6563 bp Feature: gene Location: 6742-7854 bp Feature: domain Description: Relaxase Location: 6757-7435 bp Feature: domain Description: Relaxase Location: 6757-743 5 bp Feature: gene Location: 8060-10066 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8249-8858 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8249-8858 bp Feature: domain Description: Cas1_I-II-III Location: 9068-10025 bp Feature: domain Description: Cas1_I-II-III Location: 9068-10025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13877 (conjugal transfer transcriptional regulator TraJ), Relaxase (pfam03432), RVT-CRISPR, Cas1_I-II-III (cl00656)