myRT

myRT report for GCA_003506095.1_ASM350609v1

Download annotations/find similar RTs

Seq: DNWZ01000159.1 TPA_asm: Planctomycetaceae bacterium isolate UBA11397 contig_19921, whole genome shotgun sequence (38962 bp)
Overview 1 RT 1: 33214-38960 bp Neighborhood of RT #1 [33214, 38960] Macro_Appr_pase_like PLN03124 PARP PARP RVT-Retrons Feature: gene Location: 33214-33741 bp Feature: domain Description: Macro_Appr_pase_like Location: 33220-33718 bp Feature: domain Description: Macro_Appr_pase_like Location: 33220-3371 8 bp Feature: gene Location: 33746-35341 bp Feature: domain Description: PLN03124 Location: 33887-34067 bp Feature: domain Description: PLN031 24 Location: 33887-34067 bp Feature: domain Description: PARP Location: 34757-35252 bp Feature: domain Description: PARP Location: 34757-35252 bp Feature: domain Description: PARP Location: 35270-35336 bp Feature: domain Description: PARP Location: 35270-35336 bp Feature: gene Location: 35380-37341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36496-37114 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 36496-371 1 4 bp Feature: gene Location: 37344-38960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase_like, PLN03124 (poly polymerase; Provisional), PARP (pfam00644), RVT-Retrons

Seq: DNWZ01000023.1 TPA_asm: Planctomycetaceae bacterium isolate UBA11397 contig_271745, whole genome shotgun sequence (14586 bp)
Overview 1 RT 1: 507-6847 bp Neighborhood of RT #1 [507, 6847] PSCyt1 PSCyt2 RVT-Retrons Feature: gene Location: 507-1919 bp Feature: domain Description: PSCyt1 Location: 684-846 bp Feature: domain Description: PSCyt1 Location: 684-846 bp Feature: domain Description: PSCyt2 Location: 1068-1704 bp Feature: domain Description: PSCyt2 Location: 1068-1704 bp Feature: gene Location: 1959-2237 bp Feature: gene Location: 2285-3664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2816-3437 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 816-3437 bp Feature: gene Location: 3706-3849 bp Feature: gene Location: 3920-6847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PSCyt1 (pfam07635), PSCyt2 (pfam07583)