myRT

myRT report for GCA_003506435.1_ASM350643v1

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Seq: DOAQ01000037.1 TPA_asm: Prolixibacteraceae bacterium isolate UBA12447 contig_308, whole genome shotgun sequence (317748 bp)
Overview 1 RT 1: 122661-128114 bp Neighborhood of RT #1 [122661, 128371] COG1907 RVT-GII GIIM TIR_2 DUF4099 DUF3945 DUF3945 Feature: gene Location: 122661-123611 bp Feature: domain Description: COG1907 Location: 122670-123549 bp Feature: domain Description: COG1 907 Location: 1 22670-1 23549 bp Feature: gene Location: 123638-124000 bp Feature: gene Location: 124428-125654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124641-125295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 24641 -1 25295 bp Feature: domain Description: GIIM Note: maturase Location: 125376-125604 bp Feature: domain Description: GIIM Note: maturase Location: 1 25376-1 25604 bp Feature: gene Location: 125913-126851 bp Feature: domain Description: TIR_2 Location: 125922-126210 bp Feature: domain Description: TIR_2 Location: 1 25922-1 2621 0 bp Feature: gene Location: 126995-128371 bp Feature: domain Description: DUF4099 Location: 127385-127631 bp Feature: domain Description: DUF4099 Location: 1 27385-1 27631 bp Feature: domain Description: DUF3945 Location: 127727-127901 bp Feature: domain Description: DUF3945 Location: 1 27727-1 27901 bp Feature: domain Description: DUF3945 Location: 128003-128114 bp Feature: domain Description: DUF3945 Location: 1 28003-1 281 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1907 (Predicted archaeal sugar kinase ), RVT-GII, GIIM (pfam08388), TIR_2 (pfam13676), DUF4099 (pfam13351), DUF3945 (pfam13101)

Seq: DOAQ01000019.1 TPA_asm: Prolixibacteraceae bacterium isolate UBA12447 contig_351, whole genome shotgun sequence (273387 bp)
Overview 1 RT 1: 213857-218445 bp Neighborhood of RT #1 [213857, 218522] YcjR RVT-UG2 HTH_ARSR Feature: gene Location: 213857-214693 bp Feature: domain Description: YcjR Location: 214007-214679 bp Feature: domain Description: YcjR Location: 2 14007-2 14679 bp Feature: gene Location: 215197-215340 bp Feature: gene Location: 215530-217101 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 215764-216679 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 15764-2 16679 bp Feature: gene Location: 217177-217584 bp Feature: gene Location: 218193-218522 bp Feature: domain Description: HTH_ARSR Location: 218217-218445 bp Feature: domain Description: HTH_ARSR Location: 2 182 17-2 18445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcjR (COG1082), RVT-UG2, HTH_ARSR (smart00418)

Seq: DOAQ01000006.1 TPA_asm: Prolixibacteraceae bacterium isolate UBA12447 contig_4229, whole genome shotgun sequence (82553 bp)
Overview 1 RT 1: 8741-18988 bp Neighborhood of RT #1 [8741, 19029] RVT-DGRs SMC_prok_B SMC_prok_B SMC_prok_B Feature: gene Location: 8741-11905 bp Feature: gene Location: 11908-12102 bp Feature: gene Location: 12114-13379 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12324-12918 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 123 24-12918 bp Feature: gene Location: 13626-15344 bp Feature: gene Location: 15376-19029 bp Feature: domain Description: SMC_prok_B Location: 15430-15937 bp Feature: domain Description: SMC_prok_B Location: 1543 0-1593 7 bp Feature: domain Description: SMC_prok_B Location: 17377-18238 bp Feature: domain Description: SMC_prok_B Location: 173 77-1823 8 bp Feature: domain Description: SMC_prok_B Location: 18352-18988 bp Feature: domain Description: SMC_prok_B Location: 183 52-18988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SMC_prok_B (TIGR02168)

Seq: DOAQ01000046.1 TPA_asm: Prolixibacteraceae bacterium isolate UBA12447 contig_471, whole genome shotgun sequence (533375 bp)
Overview 1 RT 1: 273118-278210 bp Neighborhood of RT #1 [273118, 278210] RVT-GII GIIM Feature: gene Location: 273118-274113 bp Feature: gene Location: 274712-275536 bp Feature: gene Location: 275594-276910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275789-276404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275789-2764 04 bp Feature: domain Description: GIIM Note: maturase Location: 276476-276689 bp Feature: domain Description: GIIM Note: maturase Location: 2764 76-276689 bp Feature: gene Location: 277171-277344 bp Feature: gene Location: 277374-278210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)