myRT

myRT report for GCA_003506665.1_ASM350666v1

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Seq: DNYX01000064.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_14303, whole genome shotgun sequence (2886 bp)
Overview 1 RT 1: 453-2421 bp Neighborhood of RT #1 [453, 2483] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 453-2483 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1236-1686 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 236-1 686 bp Feature: domain Description: GIY-YIG_PLEs Location: 2184-2421 bp Feature: domain Description: GIY-YIG_PLEs Location: 21 84-2421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG17/RVT-GII/RVT-CRISPR(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: DNYX01000225.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_214, whole genome shotgun sequence (4449 bp)
Overview 1 RT 1: 2-2751 bp Neighborhood of RT #1 [2, 2858] Baculo_FP RVT-CRISPR-like Feature: gene Location: 2-505 bp Feature: domain Description: Baculo_FP Location: 17-476 bp Feature: domain Description: Baculo_FP Location: 17-476 bp Feature: gene Location: 634-762 bp Feature: gene Location: 1116-2858 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2238-2751 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 2 38-2 751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Baculo_FP (pfam03258), RVT-CRISPR

Seq: DNYX01000002.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_2190, whole genome shotgun sequence (4193 bp)
Overview 1 RT 1: 2-3590 bp Neighborhood of RT #1 [2, 4192] R1-I-EN RVT-CRISPR-like Feature: gene Location: 2-1282 bp Feature: gene Location: 1661-4192 bp Feature: domain Description: R1-I-EN Location: 1754-2123 bp Feature: domain Description: R1-I-EN Location: 1754-2123 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2960-3590 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2960-3 590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT R1-I-EN (cd09077), RVT-CRISPR

Seq: DNYX01000239.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_36698, whole genome shotgun sequence (2983 bp)
Overview 1 RT 1: 3-2980 bp Neighborhood of RT #1 [3, 2980] RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 3-2738 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 960-1092 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 960-1092 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1404-1752 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 14 04 -1752 bp Feature: domain Description: Integrase_H2C2 Location: 2211-2364 bp Feature: domain Description: Integrase_H2C2 Location: 2211-2364 bp Feature: domain Description: rve Location: 2460-2727 bp Feature: domain Description: rve Location: 24 60-2727 bp Feature: gene Location: 2804-2980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3/RVT-UG26/RVT-UG11/RVT-UG7(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: DNYX01000111.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_3889, whole genome shotgun sequence (3410 bp)
Overview 1 RT 1: 1545-2650 bp Neighborhood of RT #1 [1545, 3348] RVT-CRISPR-like Feature: gene Location: 1545-1712 bp Feature: gene Location: 979-3348 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2065-2650 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2065 -265 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: DNYX01000187.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_7096, whole genome shotgun sequence (3838 bp)
Overview 1 RT 1: 1861-3028 bp Neighborhood of RT #1 [1861, 3750] RVT-CRISPR-like Feature: gene Location: 1861-3750 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2464-3028 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 246 4-3028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: DNYX01000165.1 TPA_asm: Flavobacterium sp. isolate UBA11167 contig_7652, whole genome shotgun sequence (5006 bp)
Overview 1 RT 1: 84-4285 bp Neighborhood of RT #1 [84, 4285] RNase_HI_RT_Ty3 Integrase_H2C2 rve RVT-UNC Feature: gene Location: 84-1784 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 96-171 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 96-17 1 bp Feature: domain Description: Integrase_H2C2 Location: 741-903 bp Feature: domain Description: Integrase_H2C2 Location: 7 41-903 bp Feature: domain Description: rve Location: 945-1284 bp Feature: domain Description: rve Location: 945-1284 bp Feature: gene Location: 2376-3437 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3312-3435 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3312-3435 bp Feature: gene Location: 3812-4285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), RVT-UG17/RVT-UG20/RVT-DGRs(RVT-UNC)