myRT

myRT report for GCA_003506745.1_ASM350674v1

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Seq: DNYQ01000096.1 TPA_asm: Syntrophaceae bacterium isolate UBA8930 contig_9402, whole genome shotgun sequence (11749 bp)
Overview 1 RT 1: 8990-11503 bp Neighborhood of RT #1 [8990, 11616] PRK06064 COG1545 RVT-CRISPR-like GIIM Feature: gene Location: 8990-10243 bp Feature: domain Description: PRK06064 Location: 9071-10217 bp Feature: domain Description: PRK06064 Location: 9071 -1 021 7 bp Feature: gene Location: 10274-10684 bp Feature: domain Description: COG1545 Location: 10301-10640 bp Feature: domain Description: COG1 545 Location: 1 0301 -1 0640 bp Feature: gene Location: 10900-11616 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10960-11251 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1 0960-1 1 251 bp Feature: domain Description: GIIM Note: maturase Location: 11299-11503 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 299-1 1 503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06064 (thiolase domain-containing protein), COG1545 (Uncharacterized OB-fold protein, contains Zn-ribbon domain ), RVT-CRISPR, GIIM (pfam08388)

Seq: DNYQ01000003.1 TPA_asm: Syntrophaceae bacterium isolate UBA8930 contig_9960, whole genome shotgun sequence (10636 bp)
Overview 1 RT 1: 1796-5181 bp Neighborhood of RT #1 [1796, 5198] RecO Peptidase_U32 Peptidase_U32_C RVT-DGRs HRDC YfmG Feature: gene Location: 1796-2569 bp Feature: domain Description: RecO Location: 1811-2555 bp Feature: domain Description: RecO Location: 1811-2 555 bp Feature: gene Location: 2663-3634 bp Feature: domain Description: Peptidase_U32 Location: 2678-3332 bp Feature: domain Description: Peptidase_U32 Location: 2 678-3332 bp Feature: domain Description: Peptidase_U32_C Location: 3377-3587 bp Feature: domain Description: Peptidase_U32 _C Location: 3377-3587 bp Feature: gene Location: 3756-4352 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3966-4221 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3966-42 2 1 bp Feature: gene Location: 4349-4831 bp Feature: domain Description: HRDC Location: 4595-4793 bp Feature: domain Description: HRDC Location: 4595-4793 bp Feature: gene Location: 4968-5198 bp Feature: domain Description: YfmG Location: 4971-5181 bp Feature: domain Description: YfmG Location: 4971-5181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RecO (COG1381), Peptidase_U32 (pfam01136), Peptidase_U32_C (pfam16325), RVT-DGRs, HRDC (smart00341), YfmG (COG1262)