myRT

myRT report for GCA_003506815.1_ASM350681v1

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Seq: DNYC01000178.1 TPA_asm: Microcoleaceae bacterium UBA10368 contig_378, whole genome shotgun sequence (6355 bp)
Overview 1 RT 1: 3628-6332 bp Neighborhood of RT #1 [3628, 6352] COG4634 RVT-UG12 BaeS Feature: gene Location: 3628-3780 bp Feature: domain Description: COG4634 Location: 3631-3766 bp Feature: domain Description: COG4634 Location: 3631 -3766 bp Feature: gene Location: 3802-3963 bp Feature: gene Location: 4285-5868 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 4654-5095 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 4654-5095 bp Feature: gene Location: 5996-6352 bp Feature: domain Description: BaeS Location: 6023-6332 bp Feature: domain Description: BaeS Location: 6023-6332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4634 (Predicted nuclease, contains PIN domain, potential toxin-antitoxin system component ), RVT-UG12, BaeS (COG0642)

Seq: DNYC01000165.1 TPA_asm: Microcoleaceae bacterium UBA10368 contig_486, whole genome shotgun sequence (16091 bp)
Overview 1 RT 1: 8132-13231 bp Neighborhood of RT #1 [8132, 13344] CbiQ CbiM PDGLE RVT_N RVT-GII GIIM McrA RVT_N SUKH_6 Feature: gene Location: 8132-8788 bp Feature: domain Description: CbiQ Location: 8216-8684 bp Feature: domain Description: CbiQ Location: 82 16-8684 bp Feature: gene Location: 8781-9707 bp Feature: domain Description: CbiM Location: 8787-9402 bp Feature: domain Description: CbiM Location: 8787-9402 bp Feature: domain Description: PDGLE Location: 9456-9678 bp Feature: domain Description: PDGLE Location: 9456-9678 bp Feature: gene Location: 10327-11922 bp Feature: domain Description: RVT_N Location: 10339-10498 bp Feature: domain Description: RVT_N Location: 10339-10498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10540-11209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10540-112 09 bp Feature: domain Description: GIIM Note: maturase Location: 11308-11509 bp Feature: domain Description: GIIM Note: maturase Location: 11308-11509 bp Feature: domain Description: McrA Location: 11611-11884 bp Feature: domain Description: McrA Location: 11611-11884 bp Feature: gene Location: 11879-12097 bp Feature: domain Description: RVT_N Location: 11978-12083 bp Feature: domain Description: RVT_N Location: 11978-12 083 bp Feature: gene Location: 12859-13344 bp Feature: domain Description: SUKH_6 Location: 12937-13231 bp Feature: domain Description: SUKH_6 Location: 12 937-132 31 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbiQ (pfam02361), CbiM (pfam01891), PDGLE (pfam13190), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), SUKH_6 (pfam14568)

Seq: DNYC01000256.1 TPA_asm: Microcoleaceae bacterium UBA10368 contig_539, whole genome shotgun sequence (8342 bp)
Overview 1 RT 1: 5132-8298 bp Neighborhood of RT #1 [5132, 8339] PRK12519 PRK13920 Cupin_7 RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 5132-5698 bp Feature: domain Description: PRK12519 Location: 5147-5690 bp Feature: domain Description: PRK12519 Location: 5147-5690 bp Feature: gene Location: 5772-6437 bp Feature: domain Description: PRK13920 Location: 5892-6108 bp Feature: domain Description: PRK13 920 Location: 5892-6108 bp Feature: domain Description: Cupin_7 Location: 6150-6411 bp Feature: domain Description: Cupin_7 Location: 6150-6411 bp Feature: gene Location: 6704-7876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6710-7160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6710-7160 bp Feature: domain Description: GIIM Note: maturase Location: 7262-7472 bp Feature: domain Description: GIIM Note: maturase Location: 7262-7472 bp Feature: domain Description: McrA Location: 7562-7832 bp Feature: domain Description: McrA Location: 7562-783 2 bp Feature: gene Location: 7902-8339 bp Feature: domain Description: RVT_N Location: 7914-8121 bp Feature: domain Description: RVT_N Location: 7914-8121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8163-8298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8163 -8298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12519 (RNA polymerase sigma factor; Provisional), PRK13920 (putative anti-sigmaE protein; Provisional), Cupin_7 (pfam12973), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)