myRT

myRT report for GCA_003507155.1_ASM350715v1

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Seq: DNWL01000051.1 TPA_asm: Parabacteroides distasonis isolate UBA10776 contig_200, whole genome shotgun sequence (108393 bp)
Overview 1 RT 1: 83261-89223 bp Neighborhood of RT #1 [83261, 89223] PIN_NicB-like RVT-GII Intron_maturas2 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 83261-83902 bp Feature: domain Description: PIN_NicB-like Location: 83279-83732 bp Feature: domain Description: PIN_NicB-like Location: 83279-83732 bp Feature: gene Location: 84236-84607 bp Feature: gene Location: 84809-86617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85073-85895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85073-85895 bp Feature: domain Description: Intron_maturas2 Location: 86021-86276 bp Feature: domain Description: Intron_maturas2 Location: 86021 -86276 bp Feature: gene Location: 87168-88328 bp Feature: domain Description: Arm-DNA-bind_5 Location: 87213-87453 bp Feature: domain Description: Arm-DNA-bind_5 Location: 8721 3-87453 bp Feature: domain Description: Phage_int_SAM_5 Location: 87507-87807 bp Feature: domain Description: Phage_int_SAM_5 Location: 87507-87807 bp Feature: domain Description: INTN1_C_like Location: 87852-88311 bp Feature: domain Description: INTN1 _C_like Location: 87852-8831 1 bp Feature: gene Location: 88624-89223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_NicB-like (cd18722), RVT-GII, Intron_maturas2 (pfam01348), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: DNWL01000067.1 TPA_asm: Parabacteroides distasonis isolate UBA10776 contig_2491, whole genome shotgun sequence (27796 bp)
Overview 1 RT 1: 6772-9415 bp Neighborhood of RT #1 [6772, 9420] HTH_XRE RVT-Retrons RhaT Feature: gene Location: 6772-7002 bp Feature: gene Location: 7030-7335 bp Feature: domain Description: HTH_XRE Location: 7042-7204 bp Feature: domain Description: HTH_XRE Location: 7042 -72 04 bp Feature: gene Location: 7563-8192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7569-8013 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7569-8013 bp Feature: gene Location: 8335-8526 bp Feature: gene Location: 8548-9420 bp Feature: domain Description: RhaT Location: 8584-9415 bp Feature: domain Description: RhaT Location: 8584-9415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, RhaT (TIGR00776)

Seq: DNWL01000025.1 TPA_asm: Parabacteroides distasonis isolate UBA10776 contig_582, whole genome shotgun sequence (56880 bp)
Overview 1 RT 1: 51531-56877 bp Neighborhood of RT #1 [51531, 56877] RVT-DGRs Feature: gene Location: 51531-52448 bp Feature: gene Location: 53138-53332 bp Feature: gene Location: 53436-54950 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53643-54390 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53 643 -543 90 bp Feature: gene Location: 55008-55403 bp Feature: gene Location: 55708-56877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs