myRT

myRT report for GCA_003507535.1_ASM350753v1

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Seq: DNVK01000144.1 TPA_asm: Lachnospiraceae bacterium isolate UBA10602 contig_1568, whole genome shotgun sequence (29801 bp)
Overview 1 RT 1: 19751-25502 bp Neighborhood of RT #1 [19751, 25726] AHBA_syn YdcF-like RVT-UG7 YdhJ YwgA Feature: gene Location: 19751-20920 bp Feature: domain Description: AHBA_syn Location: 19952-20900 bp Feature: domain Description: AHBA_syn Location: 1 9952-20900 bp Feature: gene Location: 21072-21764 bp Feature: domain Description: YdcF-like Location: 21252-21732 bp Feature: domain Description: YdcF-like Location: 21 252-21 732 bp Feature: gene Location: 21826-23424 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 22261-22666 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 22261 -22666 bp Feature: gene Location: 23737-25185 bp Feature: domain Description: YdhJ Location: 23743-25015 bp Feature: domain Description: YdhJ Location: 23743-2501 5 bp Feature: gene Location: 25205-25726 bp Feature: domain Description: YwgA Location: 25241-25502 bp Feature: domain Description: YwgA Location: 25241 -25502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AHBA_syn (cd00616), YdcF-like (cl00630), RVT-UG7, YdhJ (COG1078), YwgA (COG3465)

Seq: DNVK01000297.1 TPA_asm: Lachnospiraceae bacterium isolate UBA10602 contig_25700, whole genome shotgun sequence (3838 bp)
Overview 1 RT 1: 3-3484 bp Neighborhood of RT #1 [3, 3484] IS285 RVT-Retrons Feature: gene Location: 3-221 bp Feature: domain Description: IS285 Location: 6-207 bp Feature: domain Description: IS2 85 Location: 6-2 07 bp Feature: gene Location: 228-395 bp Feature: gene Location: 651-1781 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 876-1509 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 876-1509 bp Feature: gene Location: 1962-3161 bp Feature: gene Location: 3314-3484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-Retrons