myRT

myRT report for GCA_003507795.1_ASM350779v1

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Seq: DNUR01000080.1 TPA_asm: Alteromonas macleodii isolate UBA9190 contig_2904, whole genome shotgun sequence (22976 bp)
Overview 1 RT 1: 13877-20374 bp Neighborhood of RT #1 [13877, 20374] HMA PRK14727 RVT-UNC AAA_15 AAA_15 Feature: gene Location: 13877-15517 bp Feature: domain Description: HMA Location: 13889-14069 bp Feature: domain Description: HMA Location: 1 3889-1 4069 bp Feature: domain Description: PRK14727 Location: 14096-15512 bp Feature: domain Description: PRK1 4727 Location: 1 4096-1 551 2 bp Feature: gene Location: 15818-15946 bp Feature: gene Location: 17244-17765 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17250-17460 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 7250-1 7460 bp Feature: gene Location: 17770-19125 bp Feature: domain Description: AAA_15 Location: 17773-18004 bp Feature: domain Description: AAA_1 5 Location: 1 7773-1 8004 bp Feature: domain Description: AAA_15 Location: 18151-18514 bp Feature: domain Description: AAA_1 5 Location: 1 81 51 -1 851 4 bp Feature: gene Location: 19412-20374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HMA (pfam00403), PRK14727 (putative mercuric reductase; Provisional), RVT-UG11/RVT-Retrons/RVT-UG26/RVT-GII(RVT-UNC), AAA_15 (pfam13175)

Seq: DNUR01000162.1 TPA_asm: Alteromonas macleodii isolate UBA9190 contig_6873, whole genome shotgun sequence (3589 bp)
Overview 1 RT 1: 1-3588 bp Neighborhood of RT #1 [1, 3587] RVT_N RVT-GII GIIM HNHc LZ_Tnp_IS66 zf-IS66 Feature: gene Location: 1-195 bp Feature: gene Location: 1190-2875 bp Feature: domain Description: RVT_N Location: 1247-1490 bp Feature: domain Description: RVT_N Location: 12 47-1490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-2192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-2 192 bp Feature: domain Description: GIIM Note: maturase Location: 2252-2477 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 52 -2 477 bp Feature: domain Description: HNHc Note: nucleases Location: 2678-2825 bp Feature: domain Description: HNHc Note: nucleases Location: 2 678-2 82 5 bp Feature: gene Location: 3180-3587 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3261-3453 bp Feature: domain Description: LZ_Tnp_IS66 Location: 32 61-3453 bp Feature: domain Description: zf-IS66 Location: 3477-3588 bp Feature: domain Description: zf-IS66 Location: 3477-3588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)