myRT

myRT report for GCA_003508335.1_ASM350833v1

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Seq: DNVZ01000013.1 TPA_asm: Prevotella sp. isolate UBA11487 contig_25, whole genome shotgun sequence (32383 bp)
Overview 1 RT 1: 25425-31209 bp Neighborhood of RT #1 [25425, 31265] GT9_LPS_heptosyltransferase RVT-GII PRK09375 WcaA Feature: gene Location: 25425-26510 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 25440-26490 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 25440-26490 bp Feature: gene Location: 26718-26990 bp Feature: gene Location: 27011-28120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27353-27971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27353-27971 bp Feature: gene Location: 28863-29972 bp Feature: domain Description: PRK09375 Location: 29031-29967 bp Feature: domain Description: PRK09375 Location: 29031 -29967 bp Feature: gene Location: 30294-31265 bp Feature: domain Description: WcaA Location: 30327-31209 bp Feature: domain Description: WcaA Location: 30327-31 209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), RVT-GII, PRK09375 (quinolinate synthase NadA), WcaA (TIGR04017)

Seq: DNVZ01000029.1 TPA_asm: Prevotella sp. isolate UBA11487 contig_265, whole genome shotgun sequence (23371 bp)
Overview 1 RT 1: 49-7289 bp Neighborhood of RT #1 [49, 7441] TPR AAA-ATPase_like PDDEXK_9 RVT-GII GIIM YdiL Feature: gene Location: 49-1677 bp Feature: domain Description: TPR Location: 433-688 bp Feature: domain Description: TPR Location: 433-688 bp Feature: gene Location: 1760-3322 bp Feature: domain Description: AAA-ATPase_like Location: 1784-2612 bp Feature: domain Description: AAA-ATPase_like Location: 1784-2 612 bp Feature: domain Description: PDDEXK_9 Location: 3029-3305 bp Feature: domain Description: PDDEXK_9 Location: 302 9-3305 bp Feature: gene Location: 3637-5040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3979-4597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3979-4597 bp Feature: domain Description: GIIM Note: maturase Location: 4651-4861 bp Feature: domain Description: GIIM Note: maturase Location: 4651-4861 bp Feature: gene Location: 5649-6527 bp Feature: gene Location: 6608-7441 bp Feature: domain Description: YdiL Location: 6647-7289 bp Feature: domain Description: YdiL Location: 6647-72 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), RVT-GII, GIIM (pfam08388), TPR (smart00028), YdiL (COG1266)