myRT

myRT report for GCA_003508345.1_ASM350834v1

Download annotations/find similar RTs

Seq: DNVV01000004.1 TPA_asm: Prevotella sp. isolate UBA11488 contig_29, whole genome shotgun sequence (32347 bp)
Overview 1 RT 1: 2376-7563 bp Neighborhood of RT #1 [2376, 7622] PRK09375 RVT-GII GIIM GT9_LPS_heptosyltransferase DUF4254 Feature: gene Location: 2376-3377 bp Feature: domain Description: PRK09375 Location: 2436-3372 bp Feature: domain Description: PRK09375 Location: 2436-3372 bp Feature: gene Location: 3689-3847 bp Feature: gene Location: 4228-5631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4570-5188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4570-51 88 bp Feature: domain Description: GIIM Note: maturase Location: 5245-5443 bp Feature: domain Description: GIIM Note: maturase Location: 5245-5443 bp Feature: gene Location: 5839-6924 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 5854-6904 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 5854-6904 bp Feature: gene Location: 7020-7622 bp Feature: domain Description: DUF4254 Location: 7137-7563 bp Feature: domain Description: DUF4254 Location: 71 37-7563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09375 (quinolinate synthase NadA), RVT-GII, GIIM (pfam08388), GT9_LPS_heptosyltransferase (cd03789), DUF4254 (pfam14063)

Seq: DNVV01000011.1 TPA_asm: Prevotella sp. isolate UBA11488 contig_553, whole genome shotgun sequence (23352 bp)
Overview 1 RT 1: 15931-22334 bp Neighborhood of RT #1 [15931, 23296] YdiL RVT-GII GIIM AAA-ATPase_like PDDEXK_9 TPR Feature: gene Location: 15931-16764 bp Feature: domain Description: YdiL Location: 15970-16612 bp Feature: domain Description: YdiL Location: 15970-16612 bp Feature: gene Location: 16845-17723 bp Feature: gene Location: 18332-19735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18674-19292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18674-192 92 bp Feature: domain Description: GIIM Note: maturase Location: 19346-19556 bp Feature: domain Description: GIIM Note: maturase Location: 19346-19556 bp Feature: gene Location: 20050-21612 bp Feature: domain Description: AAA-ATPase_like Location: 20074-20902 bp Feature: domain Description: AAA-ATPase_like Location: 2 0074-2 0902 bp Feature: domain Description: PDDEXK_9 Location: 21319-21595 bp Feature: domain Description: PDDEXK_9 Location: 2 1319-2 1595 bp Feature: gene Location: 21821-23296 bp Feature: domain Description: TPR Location: 22079-22334 bp Feature: domain Description: TPR Location: 2 2 079-2 2 334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdiL (COG1266), RVT-GII, GIIM (pfam08388), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), TPR (smart00028)