myRT

myRT report for GCA_003508395.1_ASM350839v1

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Seq: DNVP01000038.1 TPA_asm: Spirochaetia bacterium isolate UBA12140 contig_1040, whole genome shotgun sequence (102993 bp)
Overview 1 RT 1: 35029-39211 bp Neighborhood of RT #1 [35029, 39288] polC_Gram_pos SLATT_5 RVT-UG17 GrpB DUF4300 Feature: gene Location: 35029-35613 bp Feature: domain Description: polC_Gram_pos Location: 35038-35578 bp Feature: domain Description: polC_Gram_pos Location: 35038-35578 bp Feature: gene Location: 35610-36212 bp Feature: domain Description: SLATT_5 Location: 35628-36165 bp Feature: domain Description: SLATT_5 Location: 35628-361 65 bp Feature: gene Location: 36225-37574 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36459-37047 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 36459-37047 bp Feature: gene Location: 37961-38530 bp Feature: domain Description: GrpB Location: 37967-38447 bp Feature: domain Description: GrpB Location: 37967-38447 bp Feature: gene Location: 38524-39288 bp Feature: domain Description: DUF4300 Location: 38638-39211 bp Feature: domain Description: DUF4300 Location: 38638-3921 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polC_Gram_pos (TIGR01405), SLATT_5 (pfam18160), RVT-UG17, GrpB (pfam04229), DUF4300 (pfam14133)

Seq: DNVP01000045.1 TPA_asm: Spirochaetia bacterium isolate UBA12140 contig_142, whole genome shotgun sequence (141772 bp)
Overview 1 RT 1: 61047-70280 bp Neighborhood of RT #1 [61047, 70280] T_den_put_tspse T_den_put_tspse COG4099 RVT-GII GIIM CHB_HEX_C_1 FIVAR FIVAR Flg_new Flg_new Flg_new Feature: gene Location: 61047-61916 bp Feature: domain Description: T_den_put_tspse Location: 61095-61350 bp Feature: domain Description: T_den_put_tspse Location: 61095-61350 bp Feature: domain Description: T_den_put_tspse Location: 61755-61896 bp Feature: domain Description: T_den_put_tspse Location: 61755-61896 bp Feature: gene Location: 62372-63196 bp Feature: domain Description: COG4099 Location: 62543-63173 bp Feature: domain Description: COG4099 Location: 62 543-63173 bp Feature: gene Location: 63786-64730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63792-64362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63792 -64362 bp Feature: domain Description: GIIM Note: maturase Location: 64434-64647 bp Feature: domain Description: GIIM Note: maturase Location: 64434-64647 bp Feature: gene Location: 65216-68089 bp Feature: domain Description: CHB_HEX_C_1 Location: 65342-65537 bp Feature: domain Description: CHB_HEX_C_1 Location: 65342 -65537 bp Feature: domain Description: FIVAR Location: 65579-65720 bp Feature: domain Description: FIVAR Location: 65579-6572 0 bp Feature: domain Description: FIVAR Location: 65768-65939 bp Feature: domain Description: FIVAR Location: 65768-65939 bp Feature: domain Description: Flg_new Location: 65951-66161 bp Feature: domain Description: Flg_new Location: 65951-66161 bp Feature: domain Description: Flg_new Location: 66182-66377 bp Feature: domain Description: Flg_new Location: 66182 -66377 bp Feature: domain Description: Flg_new Location: 66395-66551 bp Feature: domain Description: Flg_new Location: 66395-66551 bp Feature: gene Location: 68499-70280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), COG4099 (Predicted peptidase ), RVT-GII, GIIM (pfam08388), CHB_HEX_C_1 (pfam13290), FIVAR (pfam07554), Flg_new (pfam09479)