myRT

myRT report for GCA_003508595.1_ASM350859v1

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Seq: DNUF01000053.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10511 contig_1123, whole genome shotgun sequence (19606 bp)
Overview 1 RT 1: 751-6637 bp Neighborhood of RT #1 [751, 6637] DUF1501 RVT-G2L4 Feature: gene Location: 751-1230 bp Feature: gene Location: 1295-2881 bp Feature: domain Description: DUF1501 Location: 1613-2876 bp Feature: domain Description: DUF1 501 Location: 1 61 3-2876 bp Feature: gene Location: 2927-4246 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 3143-3749 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 31 43-3749 bp Feature: gene Location: 4466-4609 bp Feature: gene Location: 4886-6637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1501 (pfam07394), RVT-G2L4

Seq: DNUF01000013.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10511 contig_13486, whole genome shotgun sequence (21271 bp)
Overview 1 RT 1: 1236-8006 bp Neighborhood of RT #1 [1236, 8014] pfam03781 RVT-DGRs YfmG Feature: gene Location: 1236-1880 bp Feature: gene Location: 1645-6216 bp Feature: domain Description: pfam03781 Location: 5041-5608 bp Feature: domain Description: pfam03781 Location: 5041-5608 bp Feature: gene Location: 6309-7628 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6519-7167 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6519-7167 bp Feature: gene Location: 7691-7849 bp Feature: gene Location: 7877-8014 bp Feature: domain Description: YfmG Location: 7883-8006 bp Feature: domain Description: YfmG Location: 7883-8006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, YfmG (COG1262)

Seq: DNUF01000128.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10511 contig_1478, whole genome shotgun sequence (235271 bp)
Overview 1 RT 1: 80605-88351 bp Neighborhood of RT #1 [80605, 88395] pcrA Dabb RVT-Retrons COG5310 OmpR Feature: gene Location: 80605-82581 bp Feature: domain Description: pcrA Location: 80620-82531 bp Feature: domain Description: pcrA Location: 80620-8253 1 bp Feature: gene Location: 83797-84144 bp Feature: domain Description: Dabb Location: 83845-84139 bp Feature: domain Description: Dabb Location: 83 845-8413 9 bp Feature: gene Location: 84263-85750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84890-85517 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84890-85517 bp Feature: gene Location: 86091-87620 bp Feature: domain Description: COG5310 Location: 86109-87534 bp Feature: domain Description: COG53 10 Location: 86109-8753 4 bp Feature: gene Location: 87643-88395 bp Feature: domain Description: OmpR Location: 87655-88351 bp Feature: domain Description: OmpR Location: 87655-883 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pcrA (TIGR01073), Dabb (smart00886), RVT-Retrons, COG5310 (Homospermidine synthase ), OmpR (COG0745)

Seq: DNUF01000195.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10511 contig_417, whole genome shotgun sequence (192733 bp)
Overview 1 RT 1: 155721-160895 bp Neighborhood of RT #1 [155721, 160903] PRK05567 RVT-CRISPR-like PRK09283 Feature: gene Location: 155721-157202 bp Feature: domain Description: PRK05567 Location: 155733-157182 bp Feature: domain Description: PRK05567 Location: 155733-157182 bp Feature: gene Location: 157237-158229 bp Feature: gene Location: 158356-159651 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 159067-159466 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 159067-1594 66 bp Feature: gene Location: 159516-159683 bp Feature: gene Location: 159785-160903 bp Feature: domain Description: PRK09283 Location: 159926-160895 bp Feature: domain Description: PRK09283 Location: 159926-160895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05567 (inosine 5'-monophosphate dehydrogenase; Reviewed), RVT-CRISPR, PRK09283 (porphobilinogen synthase)

Seq: DNUF01000075.1 TPA_asm: Planctomycetaceae bacterium isolate UBA10511 contig_47173, whole genome shotgun sequence (4247 bp)
Overview 1 RT 1: 470-4230 bp Neighborhood of RT #1 [470, 4244] Ion_trans_2 RVT-DGRs Avd_like Feature: gene Location: 470-1384 bp Feature: domain Description: Ion_trans_2 Location: 1064-1193 bp Feature: domain Description: Ion_trans_2 Location: 1064-1193 bp Feature: gene Location: 1436-2704 bp Feature: gene Location: 2323-3447 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2536-3181 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25 36-3181 bp Feature: gene Location: 3446-3694 bp Feature: gene Location: 3900-4244 bp Feature: domain Description: Avd_like Location: 3924-4230 bp Feature: domain Description: Avd_like Location: 3924-4230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ion_trans_2 (pfam07885), RVT-DGRs, Avd_like (cd16376)