myRT

myRT report for GCA_003508715.1_ASM350871v1

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Seq: DNTV01000082.1 TPA_asm: Nitrospiraceae bacterium isolate UBA9996 contig_118206, whole genome shotgun sequence (13614 bp)
Overview 1 RT 1: 5464-10380 bp Neighborhood of RT #1 [5464, 10403] DUF2283 RVT-UG1 UPF0175 Feature: gene Location: 5464-5748 bp Feature: gene Location: 5748-5957 bp Feature: domain Description: DUF2283 Location: 5763-5904 bp Feature: domain Description: DUF2283 Location: 5763-5904 bp Feature: gene Location: 6133-9924 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6730-7222 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 6730-7222 bp Feature: gene Location: 9980-10123 bp Feature: gene Location: 10158-10403 bp Feature: domain Description: UPF0175 Location: 10173-10380 bp Feature: domain Description: UPF01 75 Location: 1 01 73-1 0380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2283 (pfam10049), RVT-UG1, UPF0175 (pfam03683)

Seq: DNTV01000130.1 TPA_asm: Nitrospiraceae bacterium isolate UBA9996 contig_98781, whole genome shotgun sequence (3881 bp)
Overview 1 RT 1: 95-2795 bp Neighborhood of RT #1 [95, 3880] RVT-DGRs MutS_I DUF1566 CarboxypepD_reg choice_anch_D CarboxypepD_reg Feature: gene Location: 95-1438 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 185-800 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 185-800 bp Feature: domain Description: MutS_I Location: 1139-1379 bp Feature: domain Description: MutS_I Location: 1139-1379 bp Feature: gene Location: 1442-3880 bp Feature: domain Description: DUF1566 Location: 1622-1964 bp Feature: domain Description: DUF1566 Location: 162 2 -1964 bp Feature: domain Description: CarboxypepD_reg Location: 1994-2216 bp Feature: domain Description: CarboxypepD_reg Location: 1994-2 2 16 bp Feature: domain Description: choice_anch_D Location: 2222-2519 bp Feature: domain Description: choice_anch_D Location: 2 2 2 2 -2 519 bp Feature: domain Description: CarboxypepD_reg Location: 2573-2795 bp Feature: domain Description: CarboxypepD_reg Location: 2 573-2 795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, MutS_I (pfam01624), DUF1566 (pfam07603), CarboxypepD_reg (pfam13620), choice_anch_D (NF012200)