myRT

myRT report for GCA_003509105.1_ASM350910v1

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Seq: DODU01000013.1 TPA_asm: Alistipes sp. isolate UBA11499 contig_1934, whole genome shotgun sequence (199761 bp)
Overview 1 RT 1: 125464-135620 bp Neighborhood of RT #1 [125464, 135620] Dam RVT-DGRs Laminin_G_3 Laminin_G_3 pfam08757 pfam08757 LRR_RI Feature: gene Location: 125464-126285 bp Feature: domain Description: Dam Location: 125467-126226 bp Feature: domain Description: Dam Location: 1 25467-1 26226 bp Feature: gene Location: 126486-126962 bp Feature: gene Location: 126959-128428 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 127340-127934 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 27340-1 27934 bp Feature: gene Location: 128682-135326 bp Feature: domain Description: Laminin_G_3 Location: 130236-130404 bp Feature: domain Description: Laminin_G_3 Location: 1 30236-1 30404 bp Feature: domain Description: Laminin_G_3 Location: 130989-131367 bp Feature: domain Description: Laminin_G_3 Location: 1 30989-1 31 367 bp Feature: domain Description: pfam08757 Location: 131628-131850 bp Feature: domain Description: pfam08757 Location: 1 31 628-1 31 850 bp Feature: domain Description: pfam08757 Location: 132159-132477 bp Feature: domain Description: pfam08757 Location: 1 321 59-1 32477 bp Feature: domain Description: LRR_RI Location: 133071-133581 bp Feature: domain Description: LRR_RI Location: 1 33071 -1 33581 bp Feature: gene Location: 135330-135620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-DGRs, Laminin_G_3 (pfam13385), pfam08757 (CotH;CotH kinase protein), LRR_RI (smart00368)

Seq: DODU01000007.1 TPA_asm: Alistipes sp. isolate UBA11499 contig_474, whole genome shotgun sequence (113890 bp)
Overview 1 RT 1: 26326-32821 bp Neighborhood of RT #1 [26326, 32821] Prophage_tail Prophage_tail RVT-DGRs Feature: gene Location: 26326-29292 bp Feature: domain Description: Prophage_tail Location: 26680-26881 bp Feature: domain Description: Prophage_tail Location: 2 6680-2 6881 bp Feature: domain Description: Prophage_tail Location: 27502-27748 bp Feature: domain Description: Prophage_tail Location: 2 7502 -2 7748 bp Feature: gene Location: 29302-29610 bp Feature: gene Location: 29684-30889 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30062-30668 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 30062 -30668 bp Feature: gene Location: 31003-31350 bp Feature: gene Location: 31394-32821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prophage_tail (pfam06605), RVT-DGRs