myRT

myRT report for GCA_003509205.1_ASM350920v1

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Seq: DONK01000166.1 TPA_asm: Alteromonas australica isolate UBA11621 contig_10528, whole genome shotgun sequence (42614 bp)
Overview 1 RT 1: 37807-42081 bp Neighborhood of RT #1 [37807, 42611] SlyB M48C_Oma1_like RVT-UG3 RVT-UG8 Feature: gene Location: 37807-38295 bp Feature: domain Description: SlyB Location: 37870-38191 bp Feature: domain Description: SlyB Location: 37870-381 91 bp Feature: gene Location: 38503-39300 bp Feature: domain Description: M48C_Oma1_like Location: 38710-39256 bp Feature: domain Description: M48C_Oma1 _like Location: 3871 0-39256 bp Feature: gene Location: 39932-41143 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 40223-40688 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 40223-40688 bp Feature: gene Location: 41133-42611 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 41637-42081 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 41 637-42081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SlyB (COG3133), M48C_Oma1_like (cd07342), RVT-UG3, RVT-UG8

Seq: DONK01000003.1 TPA_asm: Alteromonas australica isolate UBA11621 contig_26699, whole genome shotgun sequence (60214 bp)
Overview 1 RT 1: 44129-54041 bp Neighborhood of RT #1 [44129, 54217] DUF45 COG0610 RVT-UG5 YjgR YjgR SIR2_2 Feature: gene Location: 44129-44878 bp Feature: domain Description: DUF45 Location: 44237-44852 bp Feature: domain Description: DUF45 Location: 442 37-44852 bp Feature: gene Location: 44893-48174 bp Feature: domain Description: COG0610 Location: 44920-48013 bp Feature: domain Description: COG0610 Location: 4492 0-48013 bp Feature: gene Location: 48218-51160 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 48707-49163 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 48707-49163 bp Feature: gene Location: 51388-53130 bp Feature: domain Description: YjgR Location: 51838-52033 bp Feature: domain Description: YjgR Location: 51838-52 033 bp Feature: domain Description: YjgR Location: 52483-53062 bp Feature: domain Description: YjgR Location: 52 483-53062 bp Feature: gene Location: 53132-54217 bp Feature: domain Description: SIR2_2 Location: 53546-54041 bp Feature: domain Description: SIR2 _2 Location: 53546-54041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, YjgR (COG0433), SIR2_2 (pfam13289)