myRT

myRT report for GCA_003513235.1_ASM351323v1

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Seq: DORF01000087.1 TPA_asm: Cyanobacteria bacterium UBA11149 contig_1424, whole genome shotgun sequence (20196 bp)
Overview 1 RT 1: 12170-16861 bp Neighborhood of RT #1 [12170, 16866] Rnc RVT-Retrons LCIB_C_CA PRK10841 BaeS Feature: gene Location: 12170-12856 bp Feature: domain Description: Rnc Location: 12185-12842 bp Feature: domain Description: Rnc Location: 1 21 85-1 2842 bp Feature: gene Location: 12901-13041 bp Feature: gene Location: 13054-14463 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13600-14218 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 3600-1 421 8 bp Feature: gene Location: 14593-15393 bp Feature: domain Description: LCIB_C_CA Location: 14707-15343 bp Feature: domain Description: LCIB_C_CA Location: 1 4707-1 5343 bp Feature: gene Location: 15571-16866 bp Feature: domain Description: PRK10841 Location: 15595-15931 bp Feature: domain Description: PRK1 0841 Location: 1 5595-1 5931 bp Feature: domain Description: BaeS Location: 15940-16861 bp Feature: domain Description: BaeS Location: 1 5940-1 6861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rnc (COG0571), RVT-Retrons, LCIB_C_CA (pfam18599), PRK10841 (two-component system sensor histidine kinase RcsC), BaeS (COG0642)

Seq: DORF01000085.1 TPA_asm: Cyanobacteria bacterium UBA11149 contig_665, whole genome shotgun sequence (21712 bp)
Overview 1 RT 1: 3652-7611 bp Neighborhood of RT #1 [3652, 7611] YggE PRK07459 RVT_N RVT-GII GIIM PRK07459 Feature: gene Location: 3652-4383 bp Feature: domain Description: YggE Location: 3700-4381 bp Feature: domain Description: YggE Location: 3700-4381 bp Feature: gene Location: 4472-4615 bp Feature: domain Description: PRK07459 Location: 4475-4589 bp Feature: domain Description: PRK07459 Location: 4475-4589 bp Feature: gene Location: 4767-6464 bp Feature: domain Description: RVT_N Location: 4809-5055 bp Feature: domain Description: RVT_N Location: 4809-5055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5097-5772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5097-5772 bp Feature: domain Description: GIIM Note: maturase Location: 5844-6072 bp Feature: domain Description: GIIM Note: maturase Location: 5844-6072 bp Feature: gene Location: 7037-7201 bp Feature: domain Description: PRK07459 Location: 7040-7187 bp Feature: domain Description: PRK07459 Location: 7040-7187 bp Feature: gene Location: 7402-7611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YggE (COG2968), PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: DORF01000449.1 TPA_asm: Cyanobacteria bacterium UBA11149 contig_97, whole genome shotgun sequence (31396 bp)
Overview 1 RT 1: 25079-27563 bp Neighborhood of RT #1 [25079, 27563] RVT-UG7 Feature: gene Location: 25079-25330 bp Feature: gene Location: 25856-26230 bp Feature: gene Location: 26398-27099 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 26809-27091 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 26809-27091 bp Feature: gene Location: 27107-27364 bp Feature: gene Location: 27342-27563 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7