myRT

myRT report for GCA_003514245.1_ASM351424v1

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Seq: DORO01000120.1 TPA_asm: Propionibacteriaceae bacterium isolate UBA11030 contig_701, whole genome shotgun sequence (47787 bp)
Overview 1 RT 1: 23531-28209 bp Neighborhood of RT #1 [23531, 28209] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III CRISPR_Cas6 Feature: gene Location: 23531-24424 bp Feature: gene Location: 24445-24729 bp Feature: domain Description: Cas2_I_II_III Location: 24463-24691 bp Feature: domain Description: Cas2_I_II_III Location: 24463-24691 bp Feature: gene Location: 24720-26594 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24930-25533 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24930-25533 bp Feature: domain Description: Cas1_I-II-III Location: 25602-26559 bp Feature: domain Description: Cas1 _I-II-III Location: 25602-26559 bp Feature: gene Location: 26591-27331 bp Feature: domain Description: CRISPR_Cas6 Location: 26939-27293 bp Feature: domain Description: CRISPR_Cas6 Location: 26939-27293 bp Feature: gene Location: 27433-28209 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040)

Seq: DORO01000068.1 TPA_asm: Propionibacteriaceae bacterium isolate UBA11030 contig_7271, whole genome shotgun sequence (8001 bp)
Overview 1 RT 1: 3589-8000 bp Neighborhood of RT #1 [3589, 8000] COG3547 DDE_Tnp_ISL3 RVT-GII GIIM Feature: gene Location: 3589-4659 bp Feature: domain Description: COG3547 Location: 3622-4627 bp Feature: domain Description: COG3547 Location: 362 2 -462 7 bp Feature: gene Location: 4959-5540 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 5004-5346 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 5004-5346 bp Feature: gene Location: 5658-7193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6042-6726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6042 -672 6 bp Feature: domain Description: GIIM Note: maturase Location: 6798-6999 bp Feature: domain Description: GIIM Note: maturase Location: 6798-6999 bp Feature: gene Location: 7668-8000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388)