myRT

myRT report for GCA_003516325.1_ASM351632v1

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Seq: DPCG01000028.1 TPA_asm: Lentisphaeria bacterium isolate UBA12442 contig_352, whole genome shotgun sequence (160336 bp)
Overview 1 RT 1: 149113-152110 bp Neighborhood of RT #1 [149113, 152172] Prok-E2_D RVT-Retrons DUF4942 Feature: gene Location: 149113-149793 bp Feature: domain Description: Prok-E2_D Location: 149200-149611 bp Feature: domain Description: Prok-E2_D Location: 1 49200-1 4961 1 bp Feature: gene Location: 149890-150195 bp Feature: gene Location: 150235-151092 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 150268-150826 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 50268-1 50826 bp Feature: gene Location: 151049-151357 bp Feature: gene Location: 151369-152172 bp Feature: domain Description: DUF4942 Location: 151558-152110 bp Feature: domain Description: DUF4942 Location: 1 51 558-1 521 1 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Prok-E2_D (pfam14460), RVT-Retrons, DUF4942 (pfam13708)

Seq: DPCG01000093.1 TPA_asm: Lentisphaeria bacterium isolate UBA12442 contig_990, whole genome shotgun sequence (204182 bp)
Overview 1 RT 1: 75248-83225 bp Neighborhood of RT #1 [75248, 84085] RND_mfp AcrB AcrB RVT-Retrons SSL2 SSL2 SSL2 Feature: gene Location: 75248-76366 bp Feature: domain Description: RND_mfp Location: 75419-76328 bp Feature: domain Description: RND_mfp Location: 75419-7632 8 bp Feature: gene Location: 76363-79770 bp Feature: domain Description: AcrB Location: 76375-78328 bp Feature: domain Description: AcrB Location: 76375-7832 8 bp Feature: domain Description: AcrB Location: 78472-79720 bp Feature: domain Description: AcrB Location: 78472 -7972 0 bp Feature: gene Location: 79998-81080 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80295-80841 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 802 95-80841 bp Feature: gene Location: 81094-81282 bp Feature: gene Location: 81359-84085 bp Feature: domain Description: SSL2 Location: 81371-81722 bp Feature: domain Description: SSL2 Location: 81371-8172 2 bp Feature: domain Description: SSL2 Location: 81902-82217 bp Feature: domain Description: SSL2 Location: 81902 -82 2 17 bp Feature: domain Description: SSL2 Location: 83024-83225 bp Feature: domain Description: SSL2 Location: 8302 4-832 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RND_mfp (TIGR01730), AcrB (COG0841), RVT-Retrons, SSL2 (COG1061)