myRT

myRT report for GCA_003517675.1_ASM351767v1

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Seq: DPAC01000049.1 TPA_asm: Porphyromonadaceae bacterium isolate UBA12175 contig_1125, whole genome shotgun sequence (25680 bp)
Overview 1 RT 1: 562-8932 bp Neighborhood of RT #1 [562, 8932] SunT OMP_RagA_SusC OMP_b-brl_3 RVT-GII GIIM rSAM_Clo7bot Feature: gene Location: 562-2760 bp Feature: domain Description: SunT Location: 574-2743 bp Feature: domain Description: SunT Location: 574-2743 bp Feature: gene Location: 2762-5068 bp Feature: domain Description: OMP_RagA_SusC Location: 2822-3113 bp Feature: domain Description: OMP_RagA_SusC Location: 2822-31 1 3 bp Feature: domain Description: OMP_b-brl_3 Location: 3875-5003 bp Feature: domain Description: OMP_b-brl_3 Location: 3875-5003 bp Feature: gene Location: 5081-7873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441-6059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441 -6059 bp Feature: domain Description: GIIM Note: maturase Location: 6104-6302 bp Feature: domain Description: GIIM Note: maturase Location: 61 04-6302 bp Feature: domain Description: rSAM_Clo7bot Location: 6623-7781 bp Feature: domain Description: rSAM_Clo7bot Location: 6623-7781 bp Feature: gene Location: 8371-8523 bp Feature: gene Location: 8762-8932 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OMP_RagA_SusC (TIGR04056), OMP_b-brl_3 (pfam14905), RVT-GII, GIIM (pfam08388), rSAM_Clo7bot (TIGR04334), SunT (COG2274)

Seq: DPAC01000142.1 TPA_asm: Porphyromonadaceae bacterium isolate UBA12175 contig_17037, whole genome shotgun sequence (13761 bp)
Overview 1 RT 1: 3-3534 bp Neighborhood of RT #1 [3, 3534] RVT-GII RVT-GII DUF1080 DUF1080 Feature: gene Location: 3-407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 -2 10 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216-324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 16-32 4 bp Feature: gene Location: 697-1968 bp Feature: domain Description: DUF1080 Location: 808-1411 bp Feature: domain Description: DUF1080 Location: 808-1411 bp Feature: domain Description: DUF1080 Location: 1438-1960 bp Feature: domain Description: DUF1080 Location: 1438-1960 bp Feature: gene Location: 2017-3534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF1080 (pfam06439)