myRT

myRT report for GCA_003517725.1_ASM351772v1

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Seq: DOZZ01000208.1 TPA_asm: Bryobacterales bacterium isolate UBA10490 contig_103034, whole genome shotgun sequence (3326 bp)
Overview 1 RT 1: 3-3314 bp Neighborhood of RT #1 [3, 3314] DDE_Tnp_IS66 DDE_Tnp_IS66 RVT-GII Feature: gene Location: 3-233 bp Feature: gene Location: 483-1853 bp Feature: domain Description: DDE_Tnp_IS66 Location: 909-1224 bp Feature: domain Description: DDE_Tnp_IS66 Location: 909-1 224 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1485-1833 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 485-1 833 bp Feature: gene Location: 1863-2792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1869-2361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 869-2361 bp Feature: gene Location: 3171-3314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: DOZZ01000166.1 TPA_asm: Bryobacterales bacterium isolate UBA10490 contig_394, whole genome shotgun sequence (52266 bp)
Overview 1 RT 1: 44892-50051 bp Neighborhood of RT #1 [44892, 50059] COG4641 COG4641 His_Phos_1 RVT-GII GIIM COG4641 rpoS_proteo Feature: gene Location: 44892-45836 bp Feature: domain Description: COG4641 Location: 44904-45795 bp Feature: domain Description: COG4641 Location: 44904-45795 bp Feature: gene Location: 45921-47081 bp Feature: domain Description: COG4641 Location: 45933-46293 bp Feature: domain Description: COG4641 Location: 45933-462 93 bp Feature: domain Description: His_Phos_1 Location: 46497-47064 bp Feature: domain Description: His_Phos_1 Location: 46497-47064 bp Feature: gene Location: 47709-48956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47916-48531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47916-48531 bp Feature: domain Description: GIIM Note: maturase Location: 48576-48807 bp Feature: domain Description: GIIM Note: maturase Location: 48576-48807 bp Feature: gene Location: 49070-49588 bp Feature: domain Description: COG4641 Location: 49193-49538 bp Feature: domain Description: COG4641 Location: 49193-49538 bp Feature: gene Location: 49532-50059 bp Feature: domain Description: rpoS_proteo Location: 49706-50051 bp Feature: domain Description: rpoS_proteo Location: 49706-50051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4641 (Spore maturation protein CgeB ), His_Phos_1 (pfam00300), RVT-GII, GIIM (pfam08388), rpoS_proteo (TIGR02394)

Seq: DOZZ01000064.1 TPA_asm: Bryobacterales bacterium isolate UBA10490 contig_3974, whole genome shotgun sequence (43916 bp)
Overview 1 RT 1: 37752-43668 bp Neighborhood of RT #1 [37752, 43712] Aldo_ket_red RVT-UG12 fabD UvrA UvrA Feature: gene Location: 37752-38312 bp Feature: domain Description: Aldo_ket_red Location: 37758-38259 bp Feature: domain Description: Aldo_ket_red Location: 3 7758-3 8259 bp Feature: gene Location: 38775-39398 bp Feature: gene Location: 39489-40370 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 39870-40293 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 3 9870-40293 bp Feature: gene Location: 40518-41450 bp Feature: domain Description: fabD Location: 40521-41370 bp Feature: domain Description: fabD Location: 40521-413 70 bp Feature: gene Location: 41460-43712 bp Feature: domain Description: UvrA Location: 41733-41946 bp Feature: domain Description: UvrA Location: 4173 3 -41946 bp Feature: domain Description: UvrA Location: 41949-43668 bp Feature: domain Description: UvrA Location: 41949-43 668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aldo_ket_red (pfam00248), RVT-UG12, fabD (TIGR00128), UvrA (COG0178)