myRT

myRT report for GCA_003520045.1_ASM352004v1

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Seq: DOVO01000066.1 TPA_asm: Cyanobacteria bacterium UBA9226 contig_1241, whole genome shotgun sequence (7336 bp)
Overview 1 RT 1: 253-3800 bp Neighborhood of RT #1 [253, 3802] PRK07459 RVT_N RVT-GII GIIM PRK07459 YggE Feature: gene Location: 253-417 bp Feature: domain Description: PRK07459 Location: 256-403 bp Feature: domain Description: PRK07459 Location: 256-403 bp Feature: gene Location: 990-2687 bp Feature: domain Description: RVT_N Location: 1032-1278 bp Feature: domain Description: RVT_N Location: 1 032-1 278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1320-1995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 320-1 995 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2295 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2295 bp Feature: gene Location: 2839-2982 bp Feature: domain Description: PRK07459 Location: 2842-2956 bp Feature: domain Description: PRK07459 Location: 2842-2956 bp Feature: gene Location: 3071-3802 bp Feature: domain Description: YggE Location: 3119-3800 bp Feature: domain Description: YggE Location: 31 1 9-3800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YggE (COG2968)

Seq: DOVO01000293.1 TPA_asm: Cyanobacteria bacterium UBA9226 contig_312, whole genome shotgun sequence (30553 bp)
Overview 1 RT 1: 24696-27180 bp Neighborhood of RT #1 [24696, 27180] RVT-UG7 Feature: gene Location: 24696-24947 bp Feature: gene Location: 25473-25847 bp Feature: gene Location: 26015-26716 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 26426-26708 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2 642 6-2 6708 bp Feature: gene Location: 26724-26981 bp Feature: gene Location: 26959-27180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7

Seq: DOVO01000245.1 TPA_asm: Cyanobacteria bacterium UBA9226 contig_894, whole genome shotgun sequence (20135 bp)
Overview 1 RT 1: 3298-7980 bp Neighborhood of RT #1 [3298, 7994] PRK10841 BaeS LCIB_C_CA RVT-Retrons Rnc Feature: gene Location: 3298-4593 bp Feature: domain Description: PRK10841 Location: 3322-3658 bp Feature: domain Description: PRK10841 Location: 3 3 22-3 658 bp Feature: domain Description: BaeS Location: 3667-4588 bp Feature: domain Description: BaeS Location: 3 667-4588 bp Feature: gene Location: 4771-5571 bp Feature: domain Description: LCIB_C_CA Location: 4885-5521 bp Feature: domain Description: LCIB_C_CA Location: 4885-5521 bp Feature: gene Location: 5701-7110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6247-6865 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6247-6865 bp Feature: gene Location: 7123-7263 bp Feature: gene Location: 7308-7994 bp Feature: domain Description: Rnc Location: 7323-7980 bp Feature: domain Description: Rnc Location: 73 23 -7980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10841 (two-component system sensor histidine kinase RcsC), BaeS (COG0642), LCIB_C_CA (pfam18599), RVT-Retrons, Rnc (COG0571)