myRT

myRT report for GCA_003521145.1_ASM352114v1

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Seq: DOTL01000011.1 TPA_asm: Streptococcus sp. isolate UBA11282 contig_264, whole genome shotgun sequence (77662 bp)
Overview 1 RT 1: 26647-39168 bp Neighborhood of RT #1 [26647, 39168] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF RVT_N RVT-GII GIIM Feature: gene Location: 26647-27198 bp Feature: gene Location: 27247-32709 bp Feature: domain Description: N6_Mtase Location: 29260-29848 bp Feature: domain Description: N6_Mtase Location: 29260-29848 bp Feature: domain Description: COG4646 Location: 30442-32566 bp Feature: domain Description: COG4646 Location: 30442-32566 bp Feature: gene Location: 33207-34985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33468-34260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33468-34260 bp Feature: domain Description: Intron_maturas2 Location: 34365-34596 bp Feature: domain Description: Intron_maturas2 Location: 34365-34596 bp Feature: domain Description: HNHc Note: nucleases Location: 34761-34947 bp Feature: domain Description: HNHc Note: nucleases Location: 34761 -34947 bp Feature: gene Location: 35122-35637 bp Feature: domain Description: SF2_C_SNF Location: 35365-35578 bp Feature: domain Description: SF2_C_SNF Location: 35365-35578 bp Feature: gene Location: 35984-37855 bp Feature: RT Description: RVT_N Location: 36242-36485 bp Feature: RT Description: RVT_N Location: 36242-36485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36530-37178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36530-371 78 bp Feature: domain Description: GIIM Note: maturase Location: 37235-37463 bp Feature: domain Description: GIIM Note: maturase Location: 37235-37463 bp Feature: gene Location: 37989-38798 bp Feature: gene Location: 38869-39168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), RVT_N (pfam13655), GIIM (pfam08388)