myRT

myRT report for GCA_003523945.1_ASM352394v1

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Seq: DOFS01000079.1 TPA_asm: Nitrospiraceae bacterium isolate UBA8639 contig_496, whole genome shotgun sequence (29605 bp)
Overview 1 RT 1: 3-5883 bp Neighborhood of RT #1 [3, 5888] PRK00230 AtoC sensory_box RVT-GII group_II_RT_mat bact_FAD_ox bact_FAD_ox Feature: gene Location: 3-650 bp Feature: domain Description: PRK00230 Location: 9-645 bp Feature: domain Description: PRK00230 Location: 9-645 bp Feature: gene Location: 1795-2583 bp Feature: domain Description: AtoC Location: 1801-2170 bp Feature: domain Description: AtoC Location: 1 801 -21 70 bp Feature: domain Description: sensory_box Location: 2188-2548 bp Feature: domain Description: sensory_box Location: 21 88-2548 bp Feature: gene Location: 2889-3755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3072-3450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3072-3450 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3471-3720 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3471 -3720 bp Feature: gene Location: 3853-4128 bp Feature: gene Location: 4428-5888 bp Feature: domain Description: bact_FAD_ox Location: 4491-5049 bp Feature: domain Description: bact_FAD_ox Location: 4491 -5049 bp Feature: domain Description: bact_FAD_ox Location: 5568-5883 bp Feature: domain Description: bact_FAD_ox Location: 5568-5883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), sensory_box (TIGR00229), RVT-GII, group_II_RT_mat (TIGR04416), PRK00230 (orotidine-5'-phosphate decarboxylase), bact_FAD_ox (TIGR01679)

Seq: DOFS01000577.1 TPA_asm: Nitrospiraceae bacterium isolate UBA8639 contig_573, whole genome shotgun sequence (10192 bp)
Overview 1 RT 1: 3-1260 bp Neighborhood of RT #1 [3, 1260] RVT-DGRs Feature: gene Location: 3-728 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24-495 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4-495 bp Feature: gene Location: 776-1096 bp Feature: gene Location: 1030-1260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: DOFS01000349.1 TPA_asm: Nitrospiraceae bacterium isolate UBA8639 contig_629, whole genome shotgun sequence (7686 bp)
Overview 1 RT 1: 3-1771 bp Neighborhood of RT #1 [3, 1779] RVT-DGRs Avd_like YfmG Feature: gene Location: 3-242 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 75-240 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 75-240 bp Feature: gene Location: 374-733 bp Feature: domain Description: Avd_like Location: 404-707 bp Feature: domain Description: Avd_like Location: 404-707 bp Feature: gene Location: 949-1779 bp Feature: domain Description: YfmG Location: 1087-1771 bp Feature: domain Description: YfmG Location: 1087-1771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), YfmG (COG1262)