myRT

myRT report for GCA_003526655.1_ASM352665v1

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Seq: DPUA01000029.1 TPA_asm: Bacteroides ovatus isolate UBA9483 contig_39, whole genome shotgun sequence (312285 bp)
Overview 1 RT 1: 231639-243915 bp Neighborhood of RT #1 [231639, 244031] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 231639-232463 bp Feature: domain Description: PDDEXK_2 Location: 231660-232338 bp Feature: domain Description: PDDEXK_2 Location: 231 660-232338 bp Feature: gene Location: 232630-234837 bp Feature: gene Location: 235043-236173 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235364-235907 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235364-235907 bp Feature: gene Location: 236175-242132 bp Feature: domain Description: DUF4011 Location: 237405-237918 bp Feature: domain Description: DUF401 1 Location: 237405-23791 8 bp Feature: domain Description: DEXXQc_SF1 Location: 238257-238875 bp Feature: domain Description: DEXXQc_SF1 Location: 238257-238875 bp Feature: domain Description: DEXXQc_SF1 Location: 239685-240444 bp Feature: domain Description: DEXXQc_SF1 Location: 239685-240444 bp Feature: domain Description: TIGR00376 Location: 240573-240963 bp Feature: domain Description: TIGR00376 Location: 240573-240963 bp Feature: domain Description: MTES_1575 Location: 241116-241401 bp Feature: domain Description: MTES_1 575 Location: 241 1 1 6-241 401 bp Feature: domain Description: DUF3320 Location: 241641-241782 bp Feature: domain Description: DUF3320 Location: 241 641 -241 782 bp Feature: gene Location: 242229-244031 bp Feature: domain Description: rpsA Location: 242298-243915 bp Feature: domain Description: rpsA Location: 242298-24391 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)

Seq: DPUA01000013.1 TPA_asm: Bacteroides ovatus isolate UBA9483 contig_698, whole genome shotgun sequence (296577 bp)
Overview 1 RT 1: 91955-97415 bp Neighborhood of RT #1 [91955, 97415] DNA_processg_A RVT-Retrons Feature: gene Location: 91955-92626 bp Feature: gene Location: 92641-93567 bp Feature: domain Description: DNA_processg_A Location: 92845-93322 bp Feature: domain Description: DNA_processg_A Location: 92 845-9332 2 bp Feature: gene Location: 94040-95500 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 94241-94871 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 942 41-94871 bp Feature: gene Location: 95502-96419 bp Feature: gene Location: 96873-97415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_processg_A (pfam02481), RVT-Retrons