myRT

myRT report for GCA_003534775.1_ASM353477v1

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Seq: DPDA01000022.1 TPA_asm: Holosporales bacterium isolate UBA10155 contig_108419, whole genome shotgun sequence (5923 bp)
Overview 1 RT 1: 2532-5922 bp Neighborhood of RT #1 [2532, 5922] RAYT RVT-UG4 Feature: gene Location: 2532-2972 bp Feature: domain Description: RAYT Location: 2550-2934 bp Feature: domain Description: RAYT Location: 2550-2934 bp Feature: gene Location: 3685-3933 bp Feature: gene Location: 3971-5206 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4361-4814 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4361 -481 4 bp Feature: gene Location: 5362-5922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), RVT-UG4

Seq: DPDA01000011.1 TPA_asm: Holosporales bacterium isolate UBA10155 contig_44010, whole genome shotgun sequence (8858 bp)
Overview 1 RT 1: 3-2197 bp Neighborhood of RT #1 [3, 2197] RVT_N RVT-GII RVT-UG4 Feature: gene Location: 3-764 bp Feature: domain Description: RVT_N Location: 96-339 bp Feature: domain Description: RVT_N Location: 96-339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-750 bp Feature: gene Location: 797-1168 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 815-998 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 815-998 bp Feature: gene Location: 1216-1473 bp Feature: gene Location: 1706-2197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, RVT-UG4

Seq: DPDA01000007.1 TPA_asm: Holosporales bacterium isolate UBA10155 contig_95635, whole genome shotgun sequence (6531 bp)
Overview 1 RT 1: 293-2588 bp Neighborhood of RT #1 [293, 2629] RVT-UNC GIIM HTH_32 rve Feature: gene Location: 293-763 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 305-377 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3 05-3 77 bp Feature: domain Description: GIIM Note: maturase Location: 452-671 bp Feature: domain Description: GIIM Note: maturase Location: 452-671 bp Feature: gene Location: 880-1452 bp Feature: gene Location: 1826-2629 bp Feature: domain Description: HTH_32 Location: 2000-2240 bp Feature: domain Description: HTH_3 2 Location: 2000-2240 bp Feature: domain Description: rve Location: 2378-2588 bp Feature: domain Description: rve Location: 23 78-2588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR/RVT-DGRs(RVT-UNC), GIIM (pfam08388), HTH_32 (pfam13565), rve (pfam00665)