myRT

myRT report for GCA_003534875.1_ASM353487v1

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Seq: DPDP01000014.1 TPA_asm: Alistipes sp. isolate UBA8279 contig_4629, whole genome shotgun sequence (15705 bp)
Overview 1 RT 1: 451-2899 bp Neighborhood of RT #1 [451, 2919] RVT-GII Intron_maturas2 HNHc Relaxase Feature: gene Location: 451-2250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 715-1528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 5-1 528 bp Feature: domain Description: Intron_maturas2 Location: 1624-1903 bp Feature: domain Description: Intron_maturas2 Location: 1 624-1 903 bp Feature: domain Description: HNHc Note: nucleases Location: 2080-2227 bp Feature: domain Description: HNHc Note: nucleases Location: 2080-2227 bp Feature: gene Location: 2237-2518 bp Feature: gene Location: 2566-2919 bp Feature: domain Description: Relaxase Location: 2626-2899 bp Feature: domain Description: Relaxase Location: 2626-2899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: DPDP01000017.1 TPA_asm: Alistipes sp. isolate UBA8279 contig_5412, whole genome shotgun sequence (71674 bp)
Overview 1 RT 1: 6084-10083 bp Neighborhood of RT #1 [6084, 10083] Phage_holin_4_1 RVT-DGRs Avd_like Feature: gene Location: 6084-6560 bp Feature: domain Description: Phage_holin_4_1 Location: 6156-6411 bp Feature: domain Description: Phage_holin_4_1 Location: 6156-6411 bp Feature: gene Location: 6584-6844 bp Feature: gene Location: 6822-8219 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7149-7845 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7149-7845 bp Feature: gene Location: 8270-8665 bp Feature: domain Description: Avd_like Location: 8291-8603 bp Feature: domain Description: Avd_like Location: 82 91-8603 bp Feature: gene Location: 8737-10083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_4_1 (pfam05105), RVT-DGRs, Avd_like (cd16376)