myRT

myRT report for GCA_003535275.1_ASM353527v1

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Seq: DODX01000364.1 TPA_asm: Cupriavidus sp. isolate UBA8769 contig_2315, whole genome shotgun sequence (10919 bp)
Overview 1 RT 1: 1068-3163 bp Neighborhood of RT #1 [1068, 3163] RVT-DGRs Feature: gene Location: 1068-1256 bp Feature: gene Location: 1658-1852 bp Feature: gene Location: 1243-2373 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1495-1858 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 495-1 858 bp Feature: gene Location: 2370-2660 bp Feature: gene Location: 2657-3163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: DODX01000266.1 TPA_asm: Cupriavidus sp. isolate UBA8769 contig_689, whole genome shotgun sequence (20123 bp)
Overview 1 RT 1: 7070-16067 bp Neighborhood of RT #1 [7070, 16099] ileS PRK05627 RVT_N RVT-GII GIIM HNHc BaeS PRK15347 Feature: gene Location: 7070-9949 bp Feature: domain Description: ileS Location: 7103-9917 bp Feature: domain Description: ileS Location: 7103-9917 bp Feature: gene Location: 10069-11052 bp Feature: domain Description: PRK05627 Location: 10078-10990 bp Feature: domain Description: PRK0562 7 Location: 10078-10990 bp Feature: gene Location: 11176-12876 bp Feature: RT Description: RVT_N Location: 11233-11476 bp Feature: RT Description: RVT_N Location: 112 33-11476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11521-12169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152 1-12 169 bp Feature: domain Description: GIIM Note: maturase Location: 12226-12454 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 2 6-12 454 bp Feature: domain Description: HNHc Note: nucleases Location: 12679-12838 bp Feature: domain Description: HNHc Note: nucleases Location: 12 679-12 838 bp Feature: gene Location: 13117-13476 bp Feature: gene Location: 14087-16099 bp Feature: domain Description: BaeS Location: 14552-15656 bp Feature: domain Description: BaeS Location: 14552 -15656 bp Feature: domain Description: PRK15347 Location: 15743-16067 bp Feature: domain Description: PRK15347 Location: 15743-16067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05627 (bifunctional riboflavin kinase/FAD synthetase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), BaeS (COG0642), PRK15347 (two component system sensor kinase), ileS (TIGR00392)